C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LSM14B, SCD6 homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149657 LSM14B 9606 + 20:62122461-62135378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000279068 LSM14B-001 62122507-62135378 protein_coding
  ENST00000279069 LSM14B-002 62122527-62130605 protein_coding
  ENST00000361670 LSM14B-006 62123152-62131506 protein_coding
  ENST00000370915 LSM14B-005 62122461-62128030 protein_coding
  ENST00000400318 LSM14B-003 62122482-62130666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000279068ENST00000279069ENST00000361670ENST00000370915ENST00000400318
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000279068 6.012±0.00 4.973±0.00 1.273±0.00 6.820±3.26 3.556±2.53 3.220±1.94 1.159±0.00 7.322±0.00 4.582±0.00 4.504±1.72 18.820±18.00 10.033±5.67 34.079±14.68
ENST00000279069 N/A N/A N/A N/A N/A N/A N/A N/A 5.749±0.00 N/A N/A N/A N/A
ENST00000361670 N/A N/A 1.419±0.00 N/A N/A 1.131±0.00 N/A 0.773±0.00 N/A N/A 16.843±0.00 7.509±0.00 41.682±0.00
ENST00000370915 N/A N/A N/A N/A N/A 2.504±0.00 N/A N/A N/A 1.263±0.00 N/A N/A N/A
ENST00000400318 N/A N/A 2.650±0.00 N/A N/A N/A N/A N/A N/A 4.529±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DN CIL_0001DN_0001 CGP 20:61953469-62135378
CIL_0001DO CIL_0001DO_0001 CGP 20:62122461-62143440

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025386 lsm14b LSM14B, SCD6 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000039108 Lsm14b LSM14 homolog B (SCD6, S. cerevisiae) protein_coding Mus_musculus

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