C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fermitin family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000149781 FERMT3 9606 + 11:64206678-64223886 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000279227 FERMT3-001 64206734-64223882 protein_coding
  ENST00000345728 FERMT3-002 64206734-64223886 protein_coding
  ENST00000540554 FERMT3-003 64220835-64223120 retained_intron
  ENST00000540957 FERMT3-005 64219477-64220450 retained_intron
  ENST00000541252 FERMT3-008 64207817-64211745 protein_coding
  ENST00000541326 FERMT3-006 64211650-64220598 retained_intron
  ENST00000544997 FERMT3-009 64206678-64219322 protein_coding
  ENST00000545896 FERMT3-004 64220437-64223848 protein_coding
  ENST00000546255 FERMT3-007 64211704-64220016 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungOvaryPlacentaENST00000279227ENST00000345728ENST00000544997ENST00000545896
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Ovary Placenta
ENST00000279227 N/A N/A 0.831±0.00 2.277±0.00 N/A N/A N/A 4.754±0.00
ENST00000345728 14.981±0.00 23.284±0.00 15.383±0.00 N/A N/A 11.986±8.43 4.739±3.30 17.765±8.38
ENST00000544997 N/A N/A N/A N/A 1.187±0.00 N/A N/A 11.697±0.00
ENST00000545896 N/A 53.672±0.00 N/A N/A N/A 33.469±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002102 ISS podosome
GO:0005178 ISS integrin binding
GO:0005515 IEA protein binding
GO:0007159 IMP leukocyte cell-cell adhesion
GO:0007229 IMP integrin-mediated signaling pathway
GO:0016020 IDA membrane
GO:0030054 IEA cell junction
GO:0033622 IMP integrin activation
GO:0033632 IMP regulation of cell-cell adhesion mediated by integrin
GO:0034446 IMP substrate adhesion-dependent cell spreading
GO:0042995 IEA cell projection
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 ISS platelet aggregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030938 fermt3b fermitin family member 3b protein_coding Danio_rerio
ENSDARG00000079267 FERMT3 (2 of 2) fermitin family member 3 protein_coding Danio_rerio
ENSMUSG00000024965 Fermt3 fermitin family homolog 3 (Drosophila) protein_coding Mus_musculus

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