C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serum response factor binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151304 SRFBP1 9606 + 5:121961961-122075570 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339397 SRFBP1-001 121961961-122028619 protein_coding
  ENST00000504881 SRFBP1-002 122020530-122075570 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339397
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339397 1.139±0.00 1.577±0.00 1.030±0.02 2.996±0.00 2.345±0.31 1.320±0.13 1.546±0.10 1.931±0.91 1.982±0.00 1.000±0.63 1.825±0.90 0.961±0.15 1.069±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B3 CIL_0004B3_0001 CGP 5:121851955-122075570
CIL_0004B2 CIL_0004B2_0001 CGP 5:121961961-122078285

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075323 srfbp1 serum response factor binding protein 1 protein_coding Danio_rerio
ENSMUSG00000024528 Srfbp1 serum response factor binding protein 1 protein_coding Mus_musculus

Loading