C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151353 TMEM18 9606 - 2:667335-677439 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281017 TMEM18-001 667335-677439 protein_coding
  ENST00000355654 TMEM18-201 667975-676162 protein_coding
  ENST00000405941 TMEM18-003 669423-676704 protein_coding
  ENST00000418447 TMEM18-004 675558-676642 nonsense_mediated_decay
  ENST00000432667 TMEM18-002 667973-677406 nonsense_mediated_decay
  ENST00000461640 TMEM18-006 675609-676787 retained_intron
  ENST00000477202 TMEM18-005 669211-676662 retained_intron
  ENST00000497508 TMEM18-007 669189-670975 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281017ENST00000355654ENST00000405941ENST00000432667ENST00000477202ENST00000497508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281017 0.681±0.00 1.899±0.00 0.288±0.00 1.466±0.08 N/A 1.178±0.00 0.555±0.00 0.304±0.00 0.480±0.00 1.137±0.00 0.352±0.12 2.446±1.66 3.675±0.16 1.658±0.00
ENST00000355654 2.967±0.00 4.465±0.00 0.904±0.00 1.453±0.00 5.047±0.00 3.549±0.00 1.576±0.00 3.882±0.00 0.522±0.00 1.647±0.44 0.627±0.00 4.382±0.70 1.770±0.00 4.800±0.00
ENST00000405941 10.753±0.00 16.258±0.00 N/A 8.119±0.60 11.679±4.27 5.621±4.31 5.923±0.00 10.149±4.92 6.473±2.18 7.729±4.98 9.176±0.00 15.748±8.85 27.544±26.72 43.799±21.24
ENST00000432667 N/A N/A N/A 0.811±0.15 0.849±0.00 N/A N/A N/A 0.693±0.09 N/A 1.064±0.00 1.969±0.00 1.769±0.00 N/A
ENST00000477202 N/A N/A 0.628±0.00 N/A N/A 1.220±0.00 N/A N/A 1.435±0.33 N/A 1.089±0.00 2.549±1.53 2.153±0.00 N/A
ENST00000497508 N/A N/A N/A 1.025±0.00 N/A N/A 0.559±0.00 1.118±0.00 N/A N/A 0.887±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AS CIL_0007AS_0002 CGP 2:279558-677439

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0016021 IEA integral component of membrane
GO:0016477 IDA cell migration
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036704 tmem18 transmembrane protein 18 protein_coding Danio_rerio
ENSMUSG00000043061 Tmem18 transmembrane protein 18 protein_coding Mus_musculus

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