C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymocyte nuclear protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151500 THYN1 9606 - 11:134248279-134253370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341541 THYN1-002 134248279-134253344 protein_coding
  ENST00000352327 THYN1-001 134248288-134253350 protein_coding
  ENST00000392594 THYN1-004 134248279-134253370 protein_coding
  ENST00000392595 THYN1-005 134248279-134253248 protein_coding
  ENST00000525677 THYN1-006 134251231-134253301 processed_transcript
  ENST00000531135 THYN1-009 134248882-134253353 retained_intron
  ENST00000533781 THYN1-008 134249889-134251778 retained_intron
  ENST00000533975 THYN1-003 134249039-134253348 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341541ENST00000352327ENST00000392594ENST00000392595ENST00000533975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341541 1.969±0.00 3.631±0.00 N/A 7.629±2.97 1.744±0.00 3.179±0.00 2.897±0.00 6.735±0.00 2.214±0.60 2.554±0.00 1.605±0.00 8.430±4.17 4.500±3.52 9.336±2.87
ENST00000352327 4.614±0.00 N/A N/A 6.642±1.01 3.410±0.10 2.378±0.00 N/A N/A N/A N/A N/A 7.186±4.26 2.861±1.45 7.239±1.23
ENST00000392594 7.189±0.00 15.605±0.00 1.762±0.00 11.882±0.00 8.966±4.70 10.042±7.24 4.955±2.11 5.605±1.61 6.793±3.99 5.875±4.75 6.296±0.00 9.451±0.00 2.652±0.68 17.925±7.98
ENST00000392595 10.183±0.00 N/A N/A 5.452±0.00 N/A N/A N/A 6.019±0.00 N/A 2.289±0.00 0.277±0.00 12.180±7.02 7.989±0.39 N/A
ENST00000533975 N/A N/A 0.822±0.00 N/A 1.572±0.00 2.709±1.08 0.778±0.00 N/A N/A 1.465±0.00 N/A 3.908±0.00 N/A 11.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VG CIL_0005VG_0002 CGP 11:134224645-134253370
CIL_0004R6 CIL_0004R6_0002 CGP 11:134248279-134265855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042659 thyn1 thymocyte nuclear protein 1 protein_coding Danio_rerio
ENSMUSG00000035443 Thyn1 thymocyte nuclear protein 1 protein_coding Mus_musculus

Loading