C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium inwardly-rectifying channel, subfamily J, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151704 KCNJ1 9606 - 11:128836315-128867373 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324003 KCNJ1-002 128839826-128867281 protein_coding
  ENST00000324036 KCNJ1-001 128838155-128867373 protein_coding
  ENST00000392664 KCNJ1-004 128838744-128842534 protein_coding
  ENST00000392665 KCNJ1-005 128836315-128867296 protein_coding
  ENST00000392666 KCNJ1-201 128838015-128867373 protein_coding
  ENST00000440599 KCNJ1-003 128838057-128867370 protein_coding
  ENST00000531562 KCNJ1-006 128840064-128867296 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000392664ENST00000392665ENST00000392666ENST00000440599ENST00000531562
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000392664 0.030±0.00 0.152±0.00 N/A N/A 0.051±0.00 0.041±0.00 N/A N/A 0.027±0.00 0.036±0.00 N/A 0.037±0.00
ENST00000392665 N/A N/A 2.987±0.00 0.022±0.00 N/A 0.012±0.00 N/A N/A N/A 0.002±0.00 N/A N/A
ENST00000392666 N/A N/A 9.895±0.00 0.113±0.00 N/A N/A 46.728±0.00 N/A N/A N/A N/A 0.549±0.00
ENST00000440599 N/A N/A 4.007±0.00 N/A N/A N/A 17.723±0.00 N/A N/A N/A 0.025±0.01 N/A
ENST00000531562 N/A 0.149±0.00 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050W CIL_00050W_0002 CGP 11:128686535-128867373
CIL_000513 CIL_000513_0002 CGP 11:128836315-128921035

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 IEA kidney development
GO:0001894 IEA tissue homeostasis
GO:0005242 IEA inward rectifier potassium channel activity
GO:0005524 IEA ATP binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005886 TAS plasma membrane
GO:0006813 TAS:IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0007588 TAS excretion
GO:0008076 TAS voltage-gated potassium channel complex
GO:0009791 IEA post-embryonic development
GO:0016021 IEA integral component of membrane
GO:0070294 IEA renal sodium ion absorption
GO:0071805 IEA potassium ion transmembrane transport
GO:0072358 IEA cardiovascular system development
GO:1900128 IEA regulation of G-protein activated inward rectifier potassium channel activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002666 kcnj1b potassium inwardly-rectifying channel, subfamily J, member 1b protein_coding Danio_rerio
ENSDARG00000086248 kcnj1a.3 potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 3 protein_coding Danio_rerio
ENSDARG00000088484 kcnj1a.6 potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 6 protein_coding Danio_rerio
ENSDARG00000089060 kcnj1a.5 potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 5 protein_coding Danio_rerio
ENSDARG00000090635 kcnj1a.4 potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 protein_coding Danio_rerio
ENSDARG00000090866 kcnj1a.2 potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 protein_coding Danio_rerio
ENSDARG00000091232 kcnj1a.1 potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 protein_coding Danio_rerio
ENSMUSG00000041248 Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 protein_coding Mus_musculus

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