C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: centromere protein U
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151725 CENPU 9606 - 4:184694618-184734133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281453 CENPU-001 184694618-184734133 protein_coding
  ENST00000502461 CENPU-005 184695129-184698096 retained_intron
  ENST00000506535 CENPU-007 184698194-184713941 processed_transcript
  ENST00000508095 CENPU-006 184695349-184702481 retained_intron
  ENST00000510146 CENPU-003 184695002-184734130 nonsense_mediated_decay
  ENST00000514781 CENPU-004 184716397-184733414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000281453ENST00000510146ENST00000514781
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000281453 0.583±0.00 0.381±0.00 0.922±0.00 1.555±0.45 0.771±0.00 0.411±0.00 0.615±0.00 2.658±1.29 2.404±0.27 10.007±0.00
ENST00000510146 N/A N/A N/A N/A N/A N/A N/A 4.141±0.00 1.323±0.49 30.568±14.99
ENST00000514781 N/A N/A 1.985±0.00 N/A N/A N/A N/A 5.523±0.00 3.478±0.00 27.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0001 VISTA 4:184147184-184748475

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IEA kinetochore
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005815 IDA microtubule organizing center
GO:0005829 TAS cytosol
GO:0006334 TAS nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016032 IEA viral process
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0043009 IEA chordate embryonic development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086704 CU638740.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088924 CENPU (2 of 2) centromere protein U protein_coding Danio_rerio
ENSMUSG00000031629 Cenpu centromere protein U protein_coding Mus_musculus

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