C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151876 FBXO4 9606 + 5:41925254-41941743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281623 FBXO4-001 41925254-41941743 protein_coding
  ENST00000296812 FBXO4-002 41925254-41935085 protein_coding
  ENST00000504463 FBXO4-007 41925299-41929917 nonsense_mediated_decay
  ENST00000505566 FBXO4-004 41939298-41941570 retained_intron
  ENST00000506496 FBXO4-005 41925321-41930155 retained_intron
  ENST00000509134 FBXO4-003 41925301-41941568 protein_coding
  ENST00000513496 FBXO4-006 41925254-41934309 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281623ENST00000296812ENST00000504463ENST00000505566ENST00000509134ENST00000513496
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281623 4.012±0.00 N/A N/A 0.517±0.00 N/A 0.477±0.06 0.338±0.00 1.078±0.00 0.518±0.00 0.317±0.00 N/A 1.948±0.88 1.745±0.55 1.774±0.00
ENST00000296812 N/A N/A 0.198±0.00 0.404±0.06 N/A 0.662±0.00 N/A N/A N/A N/A 0.048±0.00 0.355±0.00 N/A 0.567±0.00
ENST00000504463 N/A N/A N/A N/A 1.787±0.00 N/A N/A N/A 1.148±0.00 N/A N/A N/A N/A N/A
ENST00000505566 N/A 2.396±0.00 N/A 0.895±0.00 N/A 0.783±0.00 0.253±0.06 0.832±0.00 N/A N/A 0.625±0.00 2.527±0.00 1.643±0.00 3.290±0.00
ENST00000509134 1.513±0.00 2.483±0.00 0.467±0.00 1.378±0.55 1.371±0.21 0.428±0.00 0.338±0.07 2.225±0.88 1.582±0.41 1.382±0.00 0.409±0.00 0.601±0.24 0.727±0.14 1.687±0.00
ENST00000513496 N/A N/A N/A N/A 3.647±0.00 1.334±0.00 0.611±0.00 N/A N/A 1.130±0.00 N/A 1.463±0.10 1.217±0.08 2.365±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0000209 IDA protein polyubiquitination
GO:0000723 IMP telomere maintenance
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0016567 IDA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0042803 IPI protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074170 FBXO4 F-box protein 4 protein_coding Danio_rerio
ENSMUSG00000022184 Fbxo4 F-box protein 4 protein_coding Mus_musculus

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