C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB GTPase activating protein 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152061 RABGAP1L 9606 + 1:174159410-174995308 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251507 RABGAP1L-001 174159517-174958182 protein_coding
  ENST00000325589 RABGAP1L-005 174700525-174990409 protein_coding
  ENST00000347255 RABGAP1L-007 174701022-174990513 protein_coding
  ENST00000357444 RABGAP1L-003 174159410-174548561 protein_coding
  ENST00000367686 RABGAP1L-009 174700731-174990341 processed_transcript
  ENST00000367687 RABGAP1L-008 174701020-174990593 protein_coding
  ENST00000367688 RABGAP1L-015 174964768-174990485 protein_coding
  ENST00000367690 RABGAP1L-004 174275100-174545911 processed_transcript
  ENST00000392064 RABGAP1L-201 174877440-174995301 protein_coding
  ENST00000457696 RABGAP1L-002 174159590-174394145 protein_coding
  ENST00000461613 RABGAP1L-017 174976029-174988807 processed_transcript
  ENST00000465412 RABGAP1L-014 174874471-174982900 protein_coding
  ENST00000469553 RABGAP1L-018 174700731-174990341 nonsense_mediated_decay
  ENST00000474375 RABGAP1L-013 174637378-174705576 processed_transcript
  ENST00000478442 RABGAP1L-010 174874458-174958182 protein_coding
  ENST00000485114 RABGAP1L-016 174964959-174993880 processed_transcript
  ENST00000486220 RABGAP1L-011 174875546-174958187 protein_coding
  ENST00000487987 RABGAP1L-012 174220712-174231245 retained_intron
  ENST00000489615 RABGAP1L-006 174799932-174995308 protein_coding
  ENST00000526253 RABGAP1L-020 174365230-174637488 processed_transcript
  ENST00000529145 RABGAP1L-021 174700413-174752354 processed_transcript
  ENST00000529474 RABGAP1L-019 174231219-174243167 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251507ENST00000325589ENST00000347255ENST00000367688ENST00000392064ENST00000465412ENST00000489615ENST00000529474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251507 5.148±0.00 6.484±0.00 N/A 3.429±0.00 5.920±3.95 6.922±0.00 19.155±7.05 2.496±0.09 4.604±3.70 8.784±5.89 1.528±0.90 3.508±1.08 2.487±0.24 6.280±1.17
ENST00000325589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.210±0.00
ENST00000347255 N/A N/A N/A 6.110±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.450±0.00 N/A
ENST00000392064 N/A N/A 1.644±0.00 1.733±0.00 N/A 1.497±0.00 N/A 0.880±0.00 1.049±0.84 4.025±2.08 0.835±0.00 1.310±0.02 1.294±0.79 4.309±0.00
ENST00000465412 N/A N/A N/A N/A N/A N/A N/A 4.723±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489615 N/A N/A N/A 5.023±1.59 2.449±0.00 1.233±0.71 N/A 1.065±0.00 0.144±0.00 N/A N/A 1.147±0.44 N/A N/A
ENST00000529474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.601±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WI CIL_0001WI_0002 CGP 1:174159410-174995308

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IDA:IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005769 IDA early endosome
GO:0005794 IDA Golgi apparatus
GO:0017137 IDA Rab GTPase binding
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0032880 IDA regulation of protein localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061757 RABGAP1L RAB GTPase activating protein 1-like protein_coding Danio_rerio
ENSMUSG00000026721 Rabgap1l RAB GTPase activating protein 1-like protein_coding Mus_musculus

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