C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ectopic P-granules autophagy protein 5 homolog (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152223 EPG5 9606 - 18:45847609-45967274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282041 EPG5-001 45847609-45967274 protein_coding
  ENST00000585906 EPG5-002 45857726-45917696 processed_transcript
  ENST00000586655 EPG5-007 45916038-45916805 processed_transcript
  ENST00000587262 EPG5-008 45855353-45858651 processed_transcript
  ENST00000587884 EPG5-006 45857822-45916454 nonsense_mediated_decay
  ENST00000587973 EPG5-010 45887851-45890191 processed_transcript
  ENST00000587974 EPG5-003 45907865-45967274 retained_intron
  ENST00000590854 EPG5-009 45847609-45867750 protein_coding
  ENST00000590884 EPG5-005 45857822-45916454 nonsense_mediated_decay
  ENST00000592272 EPG5-004 45857822-45916454 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000282041ENST00000585906ENST00000587884ENST00000587974ENST00000590854ENST00000592272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000282041 0.964±0.00 0.526±0.00 0.719±0.00 0.815±0.00 0.740±0.09 0.964±0.00 1.817±0.00 0.940±0.00 0.257±0.00 1.173±0.23 N/A 0.591±0.32 0.642±0.30 1.070±0.24
ENST00000585906 N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A 0.934±0.00 N/A N/A N/A
ENST00000587884 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.698±0.00 N/A N/A N/A N/A
ENST00000587974 N/A N/A N/A N/A 1.301±0.00 N/A N/A N/A N/A N/A 0.623±0.00 0.751±0.00 N/A N/A
ENST00000590854 0.594±0.00 1.339±0.00 N/A 0.754±0.10 0.590±0.00 0.807±0.01 0.852±0.00 1.822±0.00 0.649±0.00 0.654±0.00 0.778±0.12 1.828±0.68 1.005±0.50 1.560±0.05
ENST00000592272 N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A 0.978±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VD CIL_0007VD_0001 VISTA 18:45253091-45855264
CIL_00093J CIL_00093J_0001 VISTA 18:45288382-45890764

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006914 IEA autophagy
GO:0032456 IEA endocytic recycling
GO:0097352 IEA autophagic vacuole maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059846 EPG5 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein_coding Danio_rerio
ENSMUSG00000039840 Epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans) protein_coding Mus_musculus

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