C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium/calmodulin-dependent protein kinase IV
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152495 CAMK4 9606 + 5:111223653-111494886 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282356 CAMK4-001 111224086-111494886 protein_coding
  ENST00000502916 CAMK4-008 111357961-111473324 processed_transcript
  ENST00000504090 CAMK4-006 111224464-111365230 processed_transcript
  ENST00000504544 CAMK4-009 111224382-111449193 nonsense_mediated_decay
  ENST00000505763 CAMK4-007 111357985-111449884 processed_transcript
  ENST00000508074 CAMK4-005 111223653-111394749 protein_coding
  ENST00000509408 CAMK4-011 111224386-111416547 processed_transcript
  ENST00000509645 CAMK4-002 111481948-111485595 retained_intron
  ENST00000510858 CAMK4-013 111482452-111484598 processed_transcript
  ENST00000512453 CAMK4-004 111223950-111484585 protein_coding
  ENST00000512890 CAMK4-012 111482488-111489712 processed_transcript
  ENST00000514007 CAMK4-010 111224409-111482816 nonsense_mediated_decay
  ENST00000515231 CAMK4-003 111224382-111484766 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000282356ENST00000510858ENST00000512453ENST00000514007ENST00000515231
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000282356 0.369±0.00 N/A 2.383±0.00 0.046±0.00 0.207±0.00 0.009±0.00 0.119±0.00 N/A 0.025±0.00 N/A 0.031±0.01 0.491±0.10
ENST00000510858 N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.668±0.00 0.195±0.00 10.026±0.00
ENST00000512453 N/A N/A N/A N/A N/A N/A N/A 0.744±0.00 N/A N/A N/A 5.716±2.75
ENST00000514007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A
ENST00000515231 N/A 0.255±0.00 N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 0.076±0.00 2.513±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UQ CIL_0004UQ_0001 CGP 5:111091716-111494886
CIL_0004UT CIL_0004UT_0001 CGP 5:111223653-111512590

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004683 IEA calmodulin-dependent protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006468 IEA protein phosphorylation
GO:0006913 IEA nucleocytoplasmic transport
GO:0006954 IEA inflammatory response
GO:0007165 TAS signal transduction
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007202 TAS activation of phospholipase C activity
GO:0007268 TAS synaptic transmission
GO:0007270 IEA neuron-neuron synaptic transmission
GO:0007616 IGI long-term memory
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0033081 TAS regulation of T cell differentiation in thymus
GO:0043011 IMP myeloid dendritic cell differentiation
GO:0045087 TAS innate immune response
GO:0045670 TAS regulation of osteoclast differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046827 IEA positive regulation of protein export from nucleus
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005372 camk4 calcium/calmodulin-dependent protein kinase IV protein_coding Danio_rerio
ENSMUSG00000038128 Camk4 calcium/calmodulin-dependent protein kinase IV protein_coding Mus_musculus

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