C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin O
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152669 CCNO 9606 - 5:55231152-55233680 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282572 CCNO-001 55231152-55233680 protein_coding
  ENST00000501463 CCNO-002 55231152-55233597 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000282572ENST00000501463
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000282572 0.345±0.00 0.219±0.00 0.927±0.55 0.440±0.00 0.688±0.00 0.098±0.00 0.253±0.09 1.155±0.00 0.919±0.40 0.486±0.00 7.236±2.89
ENST00000501463 N/A N/A 1.311±0.00 0.570±0.00 N/A N/A N/A 0.836±0.00 1.082±0.54 0.194±0.04 3.804±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VR CIL_0007VR_0001 VISTA 5:54641348-55243901

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0004844 IDA uracil DNA N-glycosylase activity
GO:0005634 IEA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006281 TAS DNA repair
GO:0006284 IDA base-excision repair
GO:0006285 TAS base-excision repair, AP site formation
GO:0007049 IDA cell cycle
GO:0019901 IEA protein kinase binding
GO:0042384 IMP cilium assembly
GO:0042493 IEA response to drug
GO:0045008 TAS depyrimidination
GO:0051301 IDA cell division
GO:0051726 IEA regulation of cell cycle
GO:1903251 IMP multi-ciliated epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055250 CCNO cyclin O protein_coding Danio_rerio
ENSMUSG00000042417 Ccno cyclin O protein_coding Mus_musculus

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