C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-induced protein with tetratricopeptide repeats 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152778 IFIT5 9606 + 10:89414586-89421001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371795 IFIT5-001 89414586-89421001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371795 5.931±0.00 5.528±0.00 3.486±0.00 4.231±0.82 3.692±0.13 3.493±1.77 1.773±0.05 2.955±1.06 2.485±0.41 5.553±0.05 0.520±0.35 3.147±1.10 2.831±0.31 3.032±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BE CIL_0007BE_0007 CGP 10:89392546-89421001

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IDA tRNA binding
GO:0003723 IDA RNA binding
GO:0003727 IDA single-stranded RNA binding
GO:0005515 IEA protein binding
GO:0015629 IDA actin cytoskeleton
GO:0032587 IDA ruffle membrane
GO:0044822 IDA poly(A) RNA binding
GO:0045087 IEA innate immune response
GO:0045177 IDA apical part of cell
GO:0051607 IMP defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio

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