C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpastatin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153113 CAST 9606 + 5:96525267-96779595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309190 CAST-003 96702801-96774683 protein_coding
  ENST00000325674 CAST-201 96743627-96774679 protein_coding
  ENST00000338252 CAST-005 96662073-96773233 protein_coding
  ENST00000341926 CAST-004 96695785-96772814 protein_coding
  ENST00000348386 CAST-002 96728309-96772819 processed_transcript
  ENST00000395812 CAST-011 96662237-96774683 protein_coding
  ENST00000395813 CAST-202 96702789-96774679 protein_coding
  ENST00000421689 CAST-009 96662423-96741317 protein_coding
  ENST00000437034 CAST-041 96741342-96774683 protein_coding
  ENST00000484552 CAST-001 96743569-96773412 nonsense_mediated_decay
  ENST00000503828 CAST-038 96742221-96747399 protein_coding
  ENST00000504221 CAST-030 96702806-96715108 processed_transcript
  ENST00000504465 CAST-020 96702806-96772892 protein_coding
  ENST00000504532 CAST-035 96728588-96729703 retained_intron
  ENST00000505143 CAST-006 96529821-96740118 protein_coding
  ENST00000505402 CAST-029 96695877-96714971 processed_transcript
  ENST00000506811 CAST-025 96663025-96729691 protein_coding
  ENST00000507487 CAST-031 96662403-96726859 processed_transcript
  ENST00000507836 CAST-027 96662428-96679632 processed_transcript
  ENST00000508117 CAST-034 96702803-96736187 nonsense_mediated_decay
  ENST00000508197 CAST-033 96702857-96740104 protein_coding
  ENST00000508579 CAST-037 96741874-96772813 protein_coding
  ENST00000508608 CAST-012 96663053-96772692 protein_coding
  ENST00000508830 CAST-008 96662074-96771679 protein_coding
  ENST00000509259 CAST-039 96742195-96750621 protein_coding
  ENST00000509529 CAST-021 96768948-96773054 retained_intron
  ENST00000509602 CAST-042 96525267-96546518 processed_transcript
  ENST00000509903 CAST-017 96702806-96771679 protein_coding
  ENST00000510098 CAST-022 96757586-96779595 nonsense_mediated_decay
  ENST00000510156 CAST-016 96702802-96767482 protein_coding
  ENST00000510245 CAST-024 96663021-96675953 retained_intron
  ENST00000510500 CAST-014 96741325-96773055 protein_coding
  ENST00000510756 CAST-010 96662423-96771679 protein_coding
  ENST00000511049 CAST-013 96702800-96773570 protein_coding
  ENST00000511097 CAST-007 96662203-96746425 protein_coding
  ENST00000511782 CAST-018 96702806-96772786 protein_coding
  ENST00000512191 CAST-040 96743673-96748717 retained_intron
  ENST00000512620 CAST-032 96662475-96741585 protein_coding
  ENST00000513666 CAST-019 96702843-96755196 retained_intron
  ENST00000514055 CAST-026 96663025-96729725 protein_coding
  ENST00000514845 CAST-023 96663000-96730849 protein_coding
  ENST00000515063 CAST-036 96736176-96741809 retained_intron
  ENST00000515160 CAST-028 96662403-96696294 retained_intron
  ENST00000515663 CAST-015 96743540-96772706 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309190ENST00000325674ENST00000395812ENST00000395813ENST00000437034ENST00000484552ENST00000508579ENST00000509602ENST00000509903ENST00000510500ENST00000510756ENST00000515663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309190 N/A N/A 3.565±0.00 2.160±0.00 N/A 7.313±0.00 N/A 12.426±3.87 6.930±2.11 12.674±0.00 N/A 7.645±2.62 22.447±1.92 N/A
ENST00000325674 N/A 15.211±0.00 N/A N/A N/A N/A N/A N/A N/A 19.911±0.00 N/A 9.366±0.00 N/A 13.621±0.00
ENST00000395812 N/A N/A N/A 1.957±0.00 9.247±0.00 10.588±0.91 N/A 11.094±0.00 13.430±0.00 11.305±0.00 2.984±0.00 9.549±4.00 N/A 9.816±0.00
ENST00000395813 24.219±0.00 11.911±0.00 N/A 8.903±0.00 14.839±7.99 20.900±0.00 35.214±19.16 6.593±0.00 N/A 16.610±0.00 28.383±25.16 11.765±0.00 N/A 9.357±0.00
ENST00000437034 N/A N/A N/A 11.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 26.557±0.00 N/A
ENST00000484552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.189±0.00
ENST00000508579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.552±0.00 45.627±0.00 N/A
ENST00000509602 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A 0.076±0.00
ENST00000509903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 86.557±0.00 N/A N/A 17.041±0.00
ENST00000510500 31.259±0.00 N/A N/A N/A 16.000±0.00 19.066±0.00 38.461±12.19 N/A 17.212±7.11 N/A N/A 20.627±0.00 N/A N/A
ENST00000510756 29.615±0.00 N/A N/A N/A N/A 11.836±0.00 N/A N/A N/A N/A N/A 46.406±0.00 38.430±0.00 N/A
ENST00000515663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.289±6.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004866 TAS endopeptidase inhibitor activity
GO:0004869 IEA cysteine-type endopeptidase inhibitor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0010466 IEA negative regulation of peptidase activity
GO:0010951 IEA negative regulation of endopeptidase activity
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:2000675 IDA negative regulation of type B pancreatic cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058693 cast calpastatin protein_coding Danio_rerio
ENSMUSG00000021585 Cast calpastatin protein_coding Mus_musculus

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