C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein, axonemal, assembly factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154099 DNAAF1 9606 + 16:84145287-84178767 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378553 DNAAF1-001 84145317-84177918 protein_coding
  ENST00000562024 DNAAF1-010 84175763-84177918 retained_intron
  ENST00000563093 DNAAF1-004 84145310-84174847 nonsense_mediated_decay
  ENST00000563818 DNAAF1-005 84158842-84177917 processed_transcript
  ENST00000564928 DNAAF1-008 84176141-84178767 protein_coding
  ENST00000567666 DNAAF1-007 84159082-84169976 processed_transcript
  ENST00000567918 DNAAF1-003 84145310-84159748 nonsense_mediated_decay
  ENST00000569735 DNAAF1-009 84175933-84177917 protein_coding
  ENST00000570298 DNAAF1-002 84145287-84177918 retained_intron
  ENST00000623406 DNAAF1-006 84175228-84177916 TEC

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLungOvaryTestisENST00000378553ENST00000563093ENST00000570298
Transcript ID Bladder Brain Lung Ovary Testis
ENST00000378553 0.455±0.00 0.225±0.00 4.824±0.00 N/A 38.414±14.05
ENST00000563093 N/A N/A N/A N/A 28.936±0.00
ENST00000570298 N/A 0.126±0.00 1.690±0.90 4.018±0.00 4.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZQ CIL_0004ZQ_0001 CGP 16:84122146-84178767
CIL_0002AR CIL_0002AR_0001 CGP 16:84145287-84187070

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0003341 IMP cilium movement
GO:0003356 IMP regulation of cilium beat frequency
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005930 IDA axoneme
GO:0030324 IMP lung development
GO:0035469 IMP determination of pancreatic left/right asymmetry
GO:0036158 IMP outer dynein arm assembly
GO:0036159 IMP inner dynein arm assembly
GO:0044458 IEA:IMP motile cilium assembly
GO:0045502 IMP dynein binding
GO:0060271 IMP cilium morphogenesis
GO:0060287 IC epithelial cilium movement involved in determination of left/right asymmetry
GO:0060972 IMP left/right pattern formation
GO:0070286 IMP axonemal dynein complex assembly
GO:0071907 IMP determination of digestive tract left/right asymmetry
GO:0071910 IMP determination of liver left/right asymmetry

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012030 dnaaf1 dynein, axonemal, assembly factor 1 protein_coding Danio_rerio
ENSMUSG00000031831 Dnaaf1 dynein, axonemal assembly factor 1 protein_coding Mus_musculus

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