C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154957 ZNF18 9606 - 17:11977439-11997510 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322748 ZNF18-002 11977445-11997372 protein_coding
  ENST00000454073 ZNF18-004 11977452-11997457 protein_coding
  ENST00000577671 ZNF18-007 11978261-11991013 protein_coding
  ENST00000580306 ZNF18-001 11977439-11997510 protein_coding
  ENST00000580613 ZNF18-201 11977445-11992917 protein_coding
  ENST00000580903 ZNF18-005 11992540-11997475 protein_coding
  ENST00000582607 ZNF18-006 11978339-11991020 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322748ENST00000454073ENST00000577671ENST00000580306ENST00000580613ENST00000582607
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322748 0.302±0.00 N/A N/A N/A 0.450±0.00 0.569±0.00 0.306±0.00 0.919±0.00 0.515±0.05 0.374±0.00 N/A N/A 0.112±0.00 N/A
ENST00000454073 0.529±0.00 1.348±0.00 N/A 1.205±0.00 1.092±0.74 0.642±0.46 0.635±0.03 N/A 1.045±0.00 0.632±0.00 0.051±0.00 0.888±0.42 0.865±0.28 1.559±0.00
ENST00000577671 N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A
ENST00000580306 1.218±0.00 2.685±0.00 N/A 2.808±0.00 N/A N/A N/A 1.771±0.00 N/A 1.071±0.00 2.082±0.00 2.570±0.00 N/A N/A
ENST00000580613 N/A N/A N/A 0.199±0.00 0.459±0.00 0.350±0.00 N/A N/A N/A 0.842±0.00 0.262±0.00 2.132±0.00 1.023±0.54 5.632±0.31
ENST00000582607 N/A N/A 0.639±0.00 N/A N/A 0.816±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WK CIL_0008WK_0001 VISTA 17:11924684-12528146

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA:IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000018347 Zkscan6 zinc finger with KRAB and SCAN domains 6 protein_coding Mus_musculus

Loading