C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prominin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155066 PROM2 9606 + 2:95274453-95291308 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317620 PROM2-201 95274453-95291303 protein_coding
  ENST00000317668 PROM2-001 95274453-95291308 protein_coding
  ENST00000403131 PROM2-002 95274453-95291306 protein_coding
  ENST00000431567 PROM2-005 95274501-95291308 nonsense_mediated_decay
  ENST00000462029 PROM2-011 95288515-95289648 processed_transcript
  ENST00000463580 PROM2-006 95274492-95277996 processed_transcript
  ENST00000477767 PROM2-007 95274979-95276092 processed_transcript
  ENST00000478295 PROM2-008 95277816-95279939 retained_intron
  ENST00000487138 PROM2-003 95274473-95291267 retained_intron
  ENST00000495540 PROM2-010 95288507-95289375 processed_transcript
  ENST00000497110 PROM2-009 95279866-95286539 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317620ENST00000317668ENST00000403131ENST00000431567ENST00000462029ENST00000463580ENST00000477767ENST00000487138ENST00000497110
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317620 N/A 0.117±0.00 1.525±1.28 0.741±0.11 0.009±0.00 15.948±0.00 0.651±0.00 0.572±0.00 N/A 0.752±0.27 3.321±1.62 1.095±0.94
ENST00000317668 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A 1.685±1.89 N/A N/A
ENST00000403131 N/A N/A 0.271±0.00 N/A N/A N/A N/A N/A 0.271±0.00 N/A N/A N/A
ENST00000431567 N/A 0.166±0.04 0.756±0.00 N/A 0.056±0.00 5.344±0.00 0.164±0.00 N/A 0.099±0.00 N/A N/A 1.374±0.00
ENST00000462029 N/A 0.598±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463580 N/A N/A 0.890±0.00 N/A 0.213±0.00 N/A N/A N/A 0.282±0.00 1.342±0.00 N/A N/A
ENST00000477767 N/A N/A 2.542±0.00 10.285±0.00 N/A N/A N/A N/A N/A 5.857±0.00 N/A N/A
ENST00000487138 0.687±0.00 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A 0.030±0.00
ENST00000497110 N/A 0.513±0.00 N/A N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A 0.316±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001934 IDA positive regulation of protein phosphorylation
GO:0005886 IEA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0005902 ISS microvillus
GO:0005929 ISS cilium
GO:0009986 ISS cell surface
GO:0015485 ISS cholesterol binding
GO:0016021 IEA integral component of membrane
GO:0031346 IDA positive regulation of cell projection organization
GO:0031410 ISS cytoplasmic vesicle
GO:0042995 IDA cell projection
GO:0043088 IDA regulation of Cdc42 GTPase activity
GO:0044393 ISS microspike
GO:0045121 ISS membrane raft
GO:0048550 IDA negative regulation of pinocytosis
GO:0070062 IDA extracellular vesicular exosome
GO:0071914 ISS prominosome
GO:2001287 IDA negative regulation of caveolin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039406 prom2 prominin 2 protein_coding Danio_rerio
ENSMUSG00000027376 Prom2 prominin 2 protein_coding Mus_musculus

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