C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 55A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155099 TMEM55A 9606 - 8:90993796-91041064 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285419 TMEM55A-001 90993796-91041064 protein_coding
  ENST00000518359 TMEM55A-005 90995593-91040811 nonsense_mediated_decay
  ENST00000518869 TMEM55A-003 90995811-91040872 nonsense_mediated_decay
  ENST00000520014 TMEM55A-004 90995717-91040835 protein_coding
  ENST00000520709 TMEM55A-002 90995524-91040851 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285419ENST00000518359ENST00000518869ENST00000520014ENST00000520709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285419 0.660±0.00 3.015±0.00 N/A 2.931±0.80 2.984±1.17 0.850±0.10 N/A 3.031±0.00 1.032±0.00 0.972±0.00 0.782±0.72 2.015±0.74 1.740±0.33 4.578±0.00
ENST00000518359 N/A N/A N/A 2.699±0.00 3.718±0.00 4.361±0.00 3.441±2.25 N/A 0.576±0.00 2.129±0.00 N/A 2.367±0.68 2.191±0.33 N/A
ENST00000518869 N/A N/A 0.824±0.00 1.909±0.00 N/A 0.868±0.00 N/A N/A N/A N/A N/A 1.173±0.00 N/A N/A
ENST00000520014 N/A N/A N/A N/A N/A N/A 4.927±4.06 0.868±0.00 1.035±0.00 2.098±0.39 0.744±0.00 9.374±0.00 5.950±3.55 8.763±0.00
ENST00000520709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.485±0.78 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056034 tmem55a transmembrane protein 55A protein_coding Danio_rerio
ENSMUSG00000028221 Tmem55a transmembrane protein 55A protein_coding Mus_musculus

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