C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial iron transporter), member 28
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155287 SLC25A28 9606 - 10:99610522-99620609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370495 SLC25A28-001 99610522-99620364 protein_coding
  ENST00000434701 SLC25A28-006 99610522-99620147 protein_coding
  ENST00000479722 SLC25A28-005 99613469-99620169 retained_intron
  ENST00000496035 SLC25A28-004 99610986-99620609 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370495ENST00000434701ENST00000479722ENST00000496035
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370495 9.532±0.00 6.446±0.00 N/A 5.660±4.18 12.527±0.00 14.427±0.00 6.854±6.74 6.765±4.97 9.376±0.00 9.231±8.07 10.136±9.81 10.419±2.64 12.116±1.96 22.291±0.00
ENST00000434701 6.838±0.00 13.587±0.00 N/A 9.908±0.00 8.189±0.00 15.589±0.00 2.462±2.00 7.548±0.00 2.266±0.90 16.206±0.00 11.722±0.00 11.431±3.25 11.148±6.56 53.737±26.94
ENST00000479722 N/A N/A N/A N/A N/A 1.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496035 N/A N/A 1.350±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 15.472±0.00 19.178±0.00 87.998±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054S CIL_00054S_0001 CGP 10:99532933-99620609
CIL_00054R CIL_00054R_0001 CGP 10:99610522-99706240

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0044281 TAS small molecule metabolic process
GO:0055072 IEA iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052994 slc25a28 solute carrier family 25, member 28 protein_coding Danio_rerio
ENSDARG00000074297 slc25a28 solute carrier family 25, member 28 protein_coding Danio_rerio
ENSMUSG00000040414 Slc25a28 solute carrier family 25, member 28 protein_coding Mus_musculus

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