C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRAM domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155324 GRAMD3 9606 + 5:126360132-126496494 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285689 GRAMD3-001 126423146-126494371 protein_coding
  ENST00000502348 GRAMD3-007 126462345-126493005 protein_coding
  ENST00000503702 GRAMD3-014 126492938-126496494 processed_transcript
  ENST00000504859 GRAMD3-013 126472238-126483646 retained_intron
  ENST00000505441 GRAMD3-011 126465152-126472305 retained_intron
  ENST00000505720 GRAMD3-016 126423472-126469725 processed_transcript
  ENST00000506445 GRAMD3-009 126371313-126483549 protein_coding
  ENST00000508523 GRAMD3-012 126480017-126483549 retained_intron
  ENST00000509882 GRAMD3-018 126465146-126477783 processed_transcript
  ENST00000511134 GRAMD3-008 126465155-126493202 protein_coding
  ENST00000512579 GRAMD3-017 126480094-126485752 processed_transcript
  ENST00000513040 GRAMD3-002 126360132-126493608 protein_coding
  ENST00000513913 GRAMD3-015 126423409-126469730 processed_transcript
  ENST00000513978 GRAMD3-005 126423472-126493326 nonsense_mediated_decay
  ENST00000514099 GRAMD3-006 126423472-126493166 nonsense_mediated_decay
  ENST00000514932 GRAMD3-010 126423406-126472304 processed_transcript
  ENST00000515200 GRAMD3-004 126423146-126494371 protein_coding
  ENST00000542322 GRAMD3-201 126423177-126494161 protein_coding
  ENST00000544396 GRAMD3-202 126423177-126494161 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285689ENST00000502348ENST00000504859ENST00000505441ENST00000506445ENST00000512579ENST00000513040ENST00000513978ENST00000514099ENST00000515200ENST00000542322ENST00000544396
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285689 N/A N/A 1.130±0.00 2.425±0.00 N/A N/A N/A N/A N/A N/A 3.621±0.82 11.211±0.00 N/A
ENST00000502348 N/A N/A N/A N/A N/A 2.997±0.00 N/A 1.335±0.00 N/A N/A N/A N/A N/A
ENST00000504859 N/A N/A N/A N/A N/A N/A N/A 3.600±0.00 N/A N/A N/A N/A N/A
ENST00000505441 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.145±0.00 N/A N/A N/A
ENST00000506445 N/A N/A N/A N/A N/A 2.301±0.00 1.305±0.00 N/A N/A N/A N/A N/A N/A
ENST00000512579 N/A N/A N/A 10.321±0.00 N/A N/A N/A 4.397±0.00 5.383±0.00 N/A N/A N/A N/A
ENST00000513040 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 2.720±0.00 N/A N/A
ENST00000513978 N/A N/A N/A 7.420±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514099 N/A N/A N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A
ENST00000515200 N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 0.911±0.00 N/A N/A N/A N/A
ENST00000542322 N/A 2.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.922±0.00
ENST00000544396 3.889±0.00 N/A 1.205±0.00 10.976±0.00 3.413±0.00 4.274±1.61 4.560±4.05 1.657±0.00 4.250±0.00 0.486±0.00 6.237±4.94 4.367±0.81 0.948±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041N CIL_00041N_0001 CGP 5:124636913-126496494
CIL_00041O CIL_00041O_0001 CGP 5:126360132-126595418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005881 IDA cytoplasmic microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088075 GRAMD3 GRAM domain containing 3 protein_coding Danio_rerio
ENSMUSG00000001700 Gramd3 GRAM domain containing 3 protein_coding Mus_musculus

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