C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sortilin-related VPS10 domain containing receptor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156395 SORCS3 9606 + 10:104641101-105265235 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369699 SORCS3-201 104641328-105265235 protein_coding
  ENST00000369701 SORCS3-001 104641101-105265235 protein_coding
  ENST00000393176 SORCS3-002 105158928-105211250 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000369699ENST00000369701ENST00000393176
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000369699 N/A 0.013±0.00 0.055±0.00 1.570±0.00 0.038±0.00 0.034±0.02 0.173±0.00 0.019±0.00 0.025±0.00 0.123±0.11 0.016±0.00 0.497±0.15
ENST00000369701 0.013±0.00 N/A N/A 2.063±0.70 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393176 N/A N/A N/A N/A N/A 0.310±0.00 N/A 0.313±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R2 CIL_0001R2_0002 CGP 10:104353764-105265235
CIL_000392 CIL_000392_0002 CGP 10:104641101-107164534

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007218 NAS neuropeptide signaling pathway
GO:0007612 IEA learning
GO:0007613 IEA memory
GO:0008188 NAS neuropeptide receptor activity
GO:0016020 NAS membrane
GO:0016021 IEA integral component of membrane
GO:0097481 IEA neuronal postsynaptic density
GO:1900452 IEA regulation of long term synaptic depression

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075865 CABZ01076351.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000077349 SORCS3 (2 of 2) sortilin-related VPS10 domain containing receptor 3 protein_coding Danio_rerio
ENSMUSG00000063434 Sorcs3 sortilin-related VPS10 domain containing receptor 3 protein_coding Mus_musculus

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