C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bromodomain and PHD finger containing, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156983 BRPF1 9606 + 3:9731729-9748018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000383829 BRPF1-001 9731745-9748018 protein_coding
  ENST00000420291 BRPF1-005 9731788-9734441 protein_coding
  ENST00000424362 BRPF1-003 9731745-9748015 protein_coding
  ENST00000426583 BRPF1-006 9732480-9734456 protein_coding
  ENST00000433861 BRPF1-002 9731729-9747873 protein_coding
  ENST00000457855 BRPF1-004 9734130-9748001 protein_coding
  ENST00000469066 BRPF1-008 9743256-9743795 processed_transcript
  ENST00000497565 BRPF1-007 9745044-9747229 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000383829ENST00000424362ENST00000433861ENST00000457855ENST00000497565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000383829 0.439±0.00 1.159±0.00 N/A N/A 2.649±0.00 N/A 0.336±0.00 N/A N/A 2.577±0.00 N/A 2.241±0.87 1.311±0.74 N/A
ENST00000424362 2.433±0.00 3.064±0.00 N/A N/A 0.259±0.00 1.503±0.00 N/A 2.849±0.00 N/A N/A 3.635±0.00 2.008±1.21 2.196±0.64 4.813±1.73
ENST00000433861 0.554±0.00 N/A 0.632±0.00 0.723±0.00 N/A N/A 0.439±0.08 N/A N/A 1.113±0.21 2.041±0.00 1.168±0.48 2.906±0.00 9.027±0.00
ENST00000457855 N/A 2.682±0.00 N/A 2.469±0.00 0.843±0.14 1.020±0.74 1.496±0.00 1.161±0.84 0.966±0.60 N/A N/A 1.086±0.25 1.756±0.00 5.078±0.00
ENST00000497565 N/A N/A N/A N/A N/A N/A N/A N/A 2.268±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Z CIL_00035Z_0001 CGP 3:9703807-9748018
CIL_0002WL CIL_0002WL_0001 CGP 3:9731729-9788219

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043966 IDA histone H3 acetylation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0070776 IDA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046136 BRPF1 bromodomain and PHD finger containing, 1 protein_coding Danio_rerio
ENSMUSG00000001632 Brpf1 bromodomain and PHD finger containing, 1 protein_coding Mus_musculus

Loading