C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157349 DDX19B 9606 + 16:70289663-70335283 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288071 DDX19B-001 70299053-70335283 protein_coding
  ENST00000355992 DDX19B-004 70299194-70333823 protein_coding
  ENST00000393657 DDX19B-009 70299162-70333826 protein_coding
  ENST00000451014 DDX19B-006 70294797-70333779 protein_coding
  ENST00000562519 DDX19B-008 70299142-70333972 nonsense_mediated_decay
  ENST00000562912 DDX19B-016 70299178-70319709 nonsense_mediated_decay
  ENST00000563206 DDX19B-011 70294777-70333823 protein_coding
  ENST00000563392 DDX19B-005 70289767-70333820 protein_coding
  ENST00000566216 DDX19B-013 70289663-70329424 protein_coding
  ENST00000568008 DDX19B-014 70299169-70330066 nonsense_mediated_decay
  ENST00000568408 DDX19B-003 70299209-70329470 nonsense_mediated_decay
  ENST00000568460 DDX19B-010 70299192-70325610 nonsense_mediated_decay
  ENST00000568625 DDX19B-007 70294833-70333695 protein_coding
  ENST00000569099 DDX19B-002 70294833-70317516 processed_transcript
  ENST00000569224 DDX19B-012 70299334-70317942 retained_intron
  ENST00000570055 DDX19B-015 70294777-70319683 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288071ENST00000355992ENST00000393657ENST00000562519ENST00000563206
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288071 3.345±0.00 6.628±0.00 0.981±0.00 2.228±0.99 N/A 1.824±0.00 2.397±0.05 2.018±0.30 1.898±0.18 0.889±0.00 4.561±0.00 3.459±0.73 7.320±0.00
ENST00000355992 6.141±0.00 N/A N/A N/A 1.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393657 N/A N/A N/A N/A N/A N/A 2.717±0.00 4.014±0.00 N/A N/A 9.015±0.00 7.641±0.00 25.192±0.00
ENST00000562519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.513±0.00 N/A 15.214±0.00
ENST00000563206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.155±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005635 IDA nuclear envelope
GO:0005643 IEA nuclear pore
GO:0005737 IEA cytoplasm
GO:0006406 TAS mRNA export from nucleus
GO:0008152 IEA metabolic process
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005699 ddx19 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) protein_coding Danio_rerio
ENSMUSG00000033658 Ddx19b DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b protein_coding Mus_musculus

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