C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Down syndrome critical region gene 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157538 DSCR3 9606 - 21:37223420-37267919 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309117 DSCR3-001 37223420-37267532 protein_coding
  ENST00000398998 DSCR3-005 37225544-37267532 protein_coding
  ENST00000399000 DSCR3-002 37223420-37267919 processed_transcript
  ENST00000399001 DSCR3-006 37225299-37267351 protein_coding
  ENST00000462467 DSCR3-010 37261082-37267153 processed_transcript
  ENST00000475009 DSCR3-007 37238205-37267403 retained_intron
  ENST00000476950 DSCR3-011 37225472-37267346 protein_coding
  ENST00000480452 DSCR3-012 37233292-37267318 processed_transcript
  ENST00000488368 DSCR3-003 37225516-37267329 processed_transcript
  ENST00000492514 DSCR3-008 37238356-37267301 processed_transcript
  ENST00000495858 DSCR3-013 37230518-37233442 processed_transcript
  ENST00000497493 DSCR3-004 37223420-37229483 retained_intron
  ENST00000498789 DSCR3-009 37261082-37267340 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309117ENST00000398998ENST00000399000ENST00000476950ENST00000488368ENST00000497493ENST00000498789
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309117 9.335±0.00 7.726±0.00 3.649±0.00 4.086±2.68 8.859±0.00 4.842±2.11 6.720±4.82 9.174±6.73 6.051±1.98 4.244±3.12 7.940±6.75 9.406±3.89 12.464±0.94 4.932±0.68
ENST00000398998 N/A N/A N/A N/A N/A N/A N/A 2.322±0.00 N/A N/A N/A N/A N/A N/A
ENST00000399000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.888±0.12
ENST00000476950 N/A N/A N/A N/A 3.468±0.00 N/A N/A N/A N/A 2.848±0.00 N/A N/A N/A N/A
ENST00000488368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.140±0.00 N/A N/A
ENST00000497493 N/A 1.016±0.00 N/A 0.284±0.00 N/A N/A 0.302±0.00 N/A N/A N/A N/A 0.600±0.00 N/A N/A
ENST00000498789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.193±0.00 N/A 2.802±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D0 CIL_0001D0_0002 CGP 21:37073226-37267919
CIL_0001CZ CIL_0001CZ_0002 CGP 21:37223420-37517450

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075650 dscr3 Down syndrome critical region gene 3 protein_coding Danio_rerio
ENSMUSG00000022898 Dscr3 Down syndrome critical region gene 3 protein_coding Mus_musculus

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