C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cAMP responsive element binding protein 3-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157613 CREB3L1 9606 + 11:46277661-46321422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000527342 CREB3L1-004 46310914-46312623 retained_intron
  ENST00000530518 CREB3L1-005 46311157-46315387 protein_coding
  ENST00000534616 CREB3L1-006 46315479-46320299 processed_transcript
  ENST00000534787 CREB3L1-003 46295126-46307939 protein_coding
  ENST00000616094 CREB3L1-002 46315661-46321409 retained_intron
  ENST00000621158 CREB3L1-001 46277661-46321422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000530518ENST00000534787ENST00000616094ENST00000621158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000530518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 29.193±0.00 49.176±0.00 11.046±0.00
ENST00000534787 N/A N/A N/A N/A 10.299±0.00 N/A 0.462±0.00 N/A 2.977±0.00 N/A 0.591±0.00 N/A N/A N/A
ENST00000616094 N/A N/A N/A 0.433±0.04 N/A N/A 5.532±5.15 N/A N/A N/A N/A N/A N/A N/A
ENST00000621158 3.805±0.00 2.488±0.00 0.225±0.00 1.665±0.00 9.399±5.19 10.144±3.67 11.858±0.00 2.350±0.00 0.606±0.46 10.665±8.94 0.622±0.00 17.375±10.65 29.404±7.87 14.721±10.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002V0 CIL_0002V0_0002 CGP 11:45929323-46321422
CIL_0002UT CIL_0002UT_0002 CGP 11:46277661-46380554

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006986 IEA response to unfolded protein
GO:0016021 IEA integral component of membrane
GO:0030500 IEA regulation of bone mineralization
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015793 creb3l1 cAMP responsive element binding protein 3-like 1 protein_coding Danio_rerio
ENSMUSG00000027230 Creb3l1 cAMP responsive element binding protein 3-like 1 protein_coding Mus_musculus

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