C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peroxisomal biogenesis factor 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157911 PEX10 9606 - 1:2403964-2413797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288774 PEX10-001 2403964-2412530 protein_coding
  ENST00000447513 PEX10-002 2404819-2412571 protein_coding
  ENST00000502666 PEX10-008 2408604-2410836 nonsense_mediated_decay
  ENST00000504111 PEX10-007 2408635-2410873 processed_transcript
  ENST00000507596 PEX10-003 2404838-2412540 protein_coding
  ENST00000508384 PEX10-004 2408530-2413797 protein_coding
  ENST00000510434 PEX10-005 2406518-2412535 nonsense_mediated_decay
  ENST00000514502 PEX10-006 2408755-2412514 nonsense_mediated_decay
  ENST00000515760 PEX10-009 2408583-2410004 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000288774ENST00000447513
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000288774 N/A 1.201±0.00 6.962±0.00 N/A N/A N/A 1.865±0.00 1.552±0.00 N/A N/A
ENST00000447513 1.815±0.00 N/A 11.479±0.00 1.559±0.00 3.097±0.00 1.284±0.00 N/A 13.516±0.00 5.909±0.00 19.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425
CIL_0005YM CIL_0005YM_0002 CGP 1:2403964-2505530

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IMP intracellular
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005779 IEA integral component of peroxisomal membrane
GO:0007031 IDA peroxisome organization
GO:0008022 IPI protein C-terminus binding
GO:0008270 IEA zinc ion binding
GO:0016558 IMP protein import into peroxisome matrix
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041511 pex10 peroxisome biogenesis factor 10 protein_coding Danio_rerio
ENSMUSG00000029047 Pex10 peroxisomal biogenesis factor 10 protein_coding Mus_musculus

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