C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhophilin, Rho GTPase binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158106 RHPN1 9606 + 8:143368855-143384220 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289013 RHPN1-001 143368887-143384220 protein_coding
  ENST00000522335 RHPN1-002 143368988-143384218 retained_intron
  ENST00000522899 RHPN1-003 143379337-143382779 retained_intron
  ENST00000620174 RHPN1-201 143368855-143384219 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289013ENST00000522335ENST00000522899ENST00000620174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289013 0.496±0.00 0.578±0.00 0.287±0.00 N/A N/A 0.320±0.00 N/A 1.593±0.00 0.202±0.13 N/A 0.037±0.00 1.088±0.81 0.671±0.02 0.349±0.00
ENST00000522335 N/A N/A N/A 1.097±0.00 0.179±0.00 N/A 0.122±0.00 0.369±0.25 N/A N/A N/A 5.901±0.00 0.498±0.00 1.810±0.54
ENST00000522899 0.857±0.00 2.260±0.00 N/A 3.505±0.00 1.532±0.00 0.875±0.00 N/A 2.990±0.00 0.403±0.00 4.981±0.00 0.165±0.00 3.719±1.37 0.420±0.10 1.335±0.00
ENST00000620174 N/A 1.067±0.00 N/A 0.950±0.00 N/A N/A N/A 1.103±0.00 N/A 1.151±0.70 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0001NH CIL_0001NH_0001 CGP 8:143304384-143384220
CIL_0001NI CIL_0001NI_0001 CGP 8:143368855-143430406

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052454 rhpn1 rhophilin, Rho GTPase binding protein 1 protein_coding Danio_rerio
ENSMUSG00000022580 Rhpn1 rhophilin, Rho GTPase binding protein 1 protein_coding Mus_musculus

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