C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 11 open reading frame 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158636 C11orf30 9606 + 11:76444923-76553025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334736 C11orf30-201 76445025-76551542 protein_coding
  ENST00000427574 C11orf30-007 76444923-76497231 retained_intron
  ENST00000524451 C11orf30-016 76526462-76544386 protein_coding
  ENST00000524490 C11orf30-005 76445025-76550343 protein_coding
  ENST00000524767 C11orf30-002 76446900-76550209 protein_coding
  ENST00000525038 C11orf30-004 76446900-76550511 protein_coding
  ENST00000525919 C11orf30-012 76446900-76550209 protein_coding
  ENST00000525959 C11orf30-014 76445042-76458247 processed_transcript
  ENST00000528826 C11orf30-006 76445047-76461015 retained_intron
  ENST00000529032 C11orf30-001 76446939-76553025 protein_coding
  ENST00000531641 C11orf30-010 76526479-76544868 retained_intron
  ENST00000531793 C11orf30-018 76545948-76550006 protein_coding
  ENST00000531998 C11orf30-015 76513397-76516842 protein_coding
  ENST00000532719 C11orf30-011 76542239-76550363 protein_coding
  ENST00000533248 C11orf30-003 76446900-76550209 protein_coding
  ENST00000533972 C11orf30-013 76445044-76516249 protein_coding
  ENST00000533988 C11orf30-009 76445022-76453931 protein_coding
  ENST00000534573 C11orf30-017 76542051-76544483 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334736ENST00000427574ENST00000524767ENST00000525038ENST00000525919ENST00000525959ENST00000529032ENST00000531641ENST00000531793ENST00000532719ENST00000533248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334736 1.171±0.00 0.754±0.00 N/A 1.170±0.00 0.638±0.00 1.546±0.00 0.800±0.59 0.445±0.00 0.236±0.00 2.264±0.00 1.014±0.70 1.284±0.31 0.863±0.14 1.612±0.19
ENST00000427574 N/A N/A N/A N/A 1.936±0.00 2.178±0.00 1.143±0.00 N/A 2.955±0.00 2.660±0.00 N/A 1.985±0.00 N/A N/A
ENST00000524767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.714±0.00 N/A 1.555±0.00
ENST00000525038 N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A 0.832±0.00 N/A 0.597±0.00 0.472±0.00 N/A
ENST00000525919 N/A 0.639±0.00 N/A N/A N/A 0.702±0.00 0.758±0.00 1.376±0.00 N/A N/A N/A 1.013±0.00 N/A N/A
ENST00000525959 N/A N/A 7.700±0.00 N/A 8.718±0.00 14.713±0.00 7.858±0.00 4.610±0.00 N/A 11.602±0.00 12.673±0.00 12.772±0.00 N/A N/A
ENST00000529032 1.298±0.00 N/A 0.277±0.00 N/A 0.456±0.00 0.746±0.00 0.231±0.00 0.318±0.00 0.215±0.00 0.647±0.00 0.357±0.00 0.650±0.05 0.720±0.07 N/A
ENST00000531641 N/A N/A N/A N/A N/A N/A N/A 0.936±0.00 N/A N/A N/A N/A N/A N/A
ENST00000531793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.048±0.00 N/A 5.587±0.00
ENST00000532719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.899±0.00 2.904±0.00
ENST00000533248 N/A N/A 0.985±0.00 N/A N/A 0.799±0.00 N/A N/A N/A N/A 1.021±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0042803 IEA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059059 C10H11orf30 chromosome 11 open reading frame 30 protein_coding Danio_rerio
ENSMUSG00000035401 2210018M11Rik RIKEN cDNA 2210018M11 gene protein_coding Mus_musculus

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