C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 1-acylglycerol-3-phosphate O-acyltransferase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158669 AGPAT6 9606 + 8:41577187-41625001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396987 AGPAT6-001 41578200-41625001 protein_coding
  ENST00000518628 AGPAT6-010 41618706-41621394 retained_intron
  ENST00000519853 AGPAT6-006 41578215-41610812 protein_coding
  ENST00000519921 AGPAT6-011 41610256-41615048 retained_intron
  ENST00000520223 AGPAT6-003 41578415-41599226 protein_coding
  ENST00000520258 AGPAT6-004 41578188-41598925 processed_transcript
  ENST00000521121 AGPAT6-005 41584772-41598665 processed_transcript
  ENST00000521184 AGPAT6-002 41577187-41598614 processed_transcript
  ENST00000521349 AGPAT6-009 41618532-41621373 retained_intron
  ENST00000521806 AGPAT6-007 41599048-41612236 nonsense_mediated_decay
  ENST00000523906 AGPAT6-008 41610778-41618813 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396987ENST00000519921ENST00000520223ENST00000521806ENST00000523906
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396987 4.227±0.00 2.521±0.00 2.291±1.51 5.084±0.00 1.759±1.45 1.882±1.53 4.254±3.64 6.366±0.00 1.640±1.30 1.483±1.10 5.718±2.94 6.049±0.91 3.477±0.87
ENST00000519921 N/A N/A 2.397±0.00 N/A 3.078±0.00 1.060±0.00 N/A 2.703±0.00 2.885±0.00 N/A N/A N/A N/A
ENST00000520223 9.433±0.00 N/A 4.571±2.49 N/A N/A 5.945±5.08 2.908±0.00 N/A 8.857±0.00 5.254±3.28 4.328±0.00 20.951±5.29 6.436±0.00
ENST00000521806 N/A N/A N/A N/A N/A N/A 4.168±0.00 N/A N/A 3.194±0.00 5.213±0.00 N/A N/A
ENST00000523906 15.877±0.00 16.495±0.00 15.939±0.00 18.574±0.00 10.862±0.00 N/A 14.151±11.83 10.844±8.20 2.733±0.00 N/A 48.510±0.00 57.884±0.00 23.775±8.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002071 IEA glandular epithelial cell maturation
GO:0004366 IDA glycerol-3-phosphate O-acyltransferase activity
GO:0005783 ISS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006631 IEA fatty acid metabolic process
GO:0006637 IDA acyl-CoA metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0006656 IDA phosphatidylcholine biosynthetic process
GO:0007595 ISS lactation
GO:0008152 IEA metabolic process
GO:0008610 ISS lipid biosynthetic process
GO:0016020 IDA membrane
GO:0016021 NAS integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0019432 ISS triglyceride biosynthetic process
GO:0030879 IEA mammary gland development
GO:0040014 IEA regulation of multicellular organism growth
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046339 IEA diacylglycerol metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019897 agpat6 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) protein_coding Danio_rerio
ENSMUSG00000031545 Agpat6 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) protein_coding Mus_musculus

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