C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 5 (sodium/inositol cotransporter), member 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158865 SLC5A11 9606 + 16:24845841-24911628 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000347898 SLC5A11-001 24845841-24911628 protein_coding
  ENST00000424767 SLC5A11-201 24845863-24911628 protein_coding
  ENST00000449109 SLC5A11-202 24845863-24911628 protein_coding
  ENST00000488922 SLC5A11-002 24845863-24911626 nonsense_mediated_decay
  ENST00000545376 SLC5A11-203 24845863-24911628 protein_coding
  ENST00000564125 SLC5A11-007 24845958-24846753 retained_intron
  ENST00000565586 SLC5A11-008 24877104-24891002 retained_intron
  ENST00000565769 SLC5A11-005 24845989-24911623 protein_coding
  ENST00000567758 SLC5A11-004 24846231-24911624 protein_coding
  ENST00000568579 SLC5A11-003 24846231-24911622 protein_coding
  ENST00000569071 SLC5A11-006 24846231-24911627 protein_coding
  ENST00000569520 SLC5A11-009 24845998-24869966 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainKidneyLiverLungOvaryPlacentaTestisENST00000347898ENST00000424767ENST00000449109ENST00000488922ENST00000565586ENST00000565769ENST00000567758ENST00000568579ENST00000569071ENST00000569520
Transcript ID Adrenal Bladder Brain Kidney Liver Lung Ovary Placenta Testis
ENST00000347898 N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00
ENST00000424767 N/A N/A 0.424±0.00 N/A N/A N/A N/A N/A N/A
ENST00000449109 N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A
ENST00000488922 N/A N/A N/A 0.026±0.00 N/A N/A 0.161±0.00 N/A N/A
ENST00000565586 N/A 1.809±0.00 N/A N/A 0.031±0.00 N/A N/A N/A N/A
ENST00000565769 N/A 0.134±0.00 2.607±1.23 N/A N/A N/A N/A N/A 0.038±0.00
ENST00000567758 N/A 0.119±0.00 N/A N/A N/A N/A 0.065±0.04 N/A N/A
ENST00000568579 0.075±0.00 N/A N/A N/A N/A N/A 0.188±0.00 0.073±0.00 0.087±0.00
ENST00000569071 N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A 0.098±0.00
ENST00000569520 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KT CIL_0005KT_0001 CGP 16:24729695-24911628
CIL_0005KU CIL_0005KU_0001 CGP 16:24845841-25015666

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006814 IEA sodium ion transport
GO:0006915 IEA apoptotic process
GO:0008643 IEA carbohydrate transport
GO:0015293 IEA symporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA:TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019932 slc5a11 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein_coding Danio_rerio
ENSMUSG00000030769 Slc5a11 solute carrier family 5 (sodium/glucose cotransporter), member 11 protein_coding Mus_musculus

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