C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MIS18 kinetochore protein A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159055 MIS18A 9606 - 21:32268219-32279069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000290130 MIS18A-001 32268219-32279069 protein_coding
  ENST00000486363 MIS18A-002 32269608-32270578 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000290130ENST00000486363
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000290130 1.991±0.00 3.413±0.00 0.184±0.00 0.816±0.21 1.328±0.90 1.350±0.57 0.484±0.40 1.112±0.77 0.750±0.12 0.296±0.13 0.094±0.07 7.680±4.54 4.155±0.95 10.885±0.56
ENST00000486363 N/A N/A 0.283±0.00 N/A 2.314±0.00 2.843±0.00 N/A 1.207±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F2 CIL_0001F2_0001 CGP 21:31873315-32279069
CIL_0001I6 CIL_0001I6_0001 CGP 21:32268219-32314784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006334 TAS nucleosome assembly
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0008150 ND biological_process
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0044030 IEA regulation of DNA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035333 mis18a MIS18 kinetochore protein homolog A (S. pombe) protein_coding Danio_rerio
ENSMUSG00000022978 Mis18a MIS18 kinetochore protein homolog A (S. pombe) protein_coding Mus_musculus

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