C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159111 MRPL10 9606 - 17:47823272-47831534 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000290208 MRPL10-003 47823461-47829673 protein_coding
  ENST00000351111 MRPL10-001 47823272-47831517 protein_coding
  ENST00000414011 MRPL10-002 47823490-47831534 protein_coding
  ENST00000421763 MRPL10-004 47823583-47831530 nonsense_mediated_decay
  ENST00000423147 MRPL10-006 47827074-47831523 nonsense_mediated_decay
  ENST00000466016 MRPL10-007 47826895-47831523 retained_intron
  ENST00000480901 MRPL10-005 47828308-47831525 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351111ENST00000414011ENST00000421763ENST00000466016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351111 2.564±0.00 5.115±0.00 N/A 0.873±0.00 1.707±0.64 3.398±2.35 1.192±0.00 2.752±0.00 0.486±0.00 0.822±0.51 N/A 16.703±0.00 5.445±2.38 2.733±0.00
ENST00000414011 8.885±0.00 12.486±0.00 0.375±0.00 5.834±5.06 4.545±4.31 8.234±7.89 10.344±9.42 12.336±0.00 5.387±3.73 8.778±0.00 11.578±6.45 13.461±14.30 19.287±9.30 12.221±0.00
ENST00000421763 2.464±0.00 N/A 2.229±0.00 1.750±0.00 5.874±0.00 N/A N/A 1.793±0.00 1.843±0.86 3.805±0.00 N/A 14.577±10.95 9.709±0.00 N/A
ENST00000466016 6.502±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.517±0.00 8.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_0004DD CIL_0004DD_0002 CGP 17:47807372-47831534

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 ISS structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005739 IDA mitochondrion
GO:0005762 ISS mitochondrial large ribosomal subunit
GO:0006412 ISS translation
GO:0030529 ISS ribonucleoprotein complex
GO:0042254 IEA ribosome biogenesis
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045091 mrpl10 mitochondrial ribosomal protein L10 protein_coding Danio_rerio
ENSMUSG00000001445 Mrpl10 mitochondrial ribosomal protein L10 protein_coding Mus_musculus

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