C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride intracellular channel 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159212 CLIC6 9606 + 21:34669389-34718227 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349499 CLIC6-002 34669389-34718227 protein_coding
  ENST00000360731 CLIC6-001 34669389-34718227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349499ENST00000360731
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349499 2.940±0.00 0.790±0.00 0.140±0.00 0.987±0.80 1.540±1.05 0.388±0.25 1.514±1.46 2.133±0.00 0.569±0.35 4.460±3.88 0.649±0.00 4.106±2.18 0.131±0.07 0.818±0.56
ENST00000360731 N/A N/A N/A N/A N/A N/A 1.783±0.00 N/A N/A N/A 0.158±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0001 VISTA 21:34142879-34745057
CIL_0007SX CIL_0007SX_0001 VISTA 21:34145397-34749042
CIL_0008OM CIL_0008OM_0001 VISTA 21:34146393-34747421
CIL_0008ZS CIL_0008ZS_0001 VISTA 21:34243666-34847364
CIL_00094R CIL_00094R_0001 VISTA 21:34258399-34859715
CIL_00078F CIL_00078F_0001 CGP 21:34669389-36004667

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008022 IEA protein C-terminus binding
GO:0031749 IEA D2 dopamine receptor binding
GO:0031750 IEA D3 dopamine receptor binding
GO:0031751 IEA D4 dopamine receptor binding
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042803 IEA protein homodimerization activity
GO:0044070 IEA regulation of anion transport
GO:0070062 IDA extracellular vesicular exosome
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001009 CLIC6 chloride intracellular channel 6 protein_coding Danio_rerio
ENSMUSG00000022949 Clic6 chloride intracellular channel 6 protein_coding Mus_musculus

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