Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	iroquois homeobox 6
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000159387	IRX6	9606	+	16:55323760-55330760	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000290552		IRX6-001	55323760-55330760	protein_coding
	ENST00000558315		IRX6-002	55325800-55327796	processed_transcript

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000290552	4.461±0.00	0.081±0.00	0.183±0.00	0.013±0.00	8.555±8.29	0.413±0.38	1.912±1.87	0.966±0.00	0.025±0.00	0.269±0.26	1.161±0.00	0.080±0.05	0.070±0.02	0.052±0.00
ENST00000558315	N/A	N/A	0.233±0.00	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	0.033±0.00	N/A	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007ON	CIL_0007ON_0002	UCNEbase	16:51906374-55391377
CIL_000986	CIL_000986_0001	VISTA	16:54740448-55341163
CIL_000989	CIL_000989_0001	VISTA	16:54745325-55346517
CIL_00098A	CIL_00098A_0001	VISTA	16:54889273-55490371
CIL_000987	CIL_000987_0001	VISTA	16:54906681-55507962
CIL_0006KT	CIL_0006KT_0001	CGP	16:54930862-55330760
CIL_0007WY	CIL_0007WY_0001	VISTA	16:54995377-55596848
CIL_000988	CIL_000988_0001	VISTA	16:55084120-55684969
CIL_00098D	CIL_00098D_0001	VISTA	16:55090504-55691826
CIL_0001GQ	CIL_0001GQ_0001	CGP	16:55323760-55506691

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003677	IEA	DNA binding
GO:0005634	IEA	nucleus
GO:0006355	IEA	regulation of transcription, DNA-templated
GO:0043565	IEA	sequence-specific DNA binding

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000034420	irx6a	iroquois homeobox protein 6a	protein_coding	Danio_rerio
ENSMUSG00000031738	Irx6	Iroquois related homeobox 6 (Drosophila)	protein_coding	Mus_musculus

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