C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159588 CCDC17 9606 - 1:45620044-45624057 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372044 CCDC17-002 45620044-45624001 nonsense_mediated_decay
  ENST00000421127 CCDC17-009 45620045-45624053 protein_coding
  ENST00000445048 CCDC17-010 45620223-45623967 protein_coding
  ENST00000464739 CCDC17-004 45620994-45622773 processed_transcript
  ENST00000479529 CCDC17-001 45620353-45624057 nonsense_mediated_decay
  ENST00000482416 CCDC17-005 45620044-45624037 retained_intron
  ENST00000491755 CCDC17-003 45620044-45624040 retained_intron
  ENST00000525599 CCDC17-007 45622281-45624049 retained_intron
  ENST00000528266 CCDC17-008 45620111-45624057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372044ENST00000421127ENST00000445048ENST00000464739ENST00000479529ENST00000482416ENST00000491755ENST00000525599ENST00000528266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372044 0.069±0.00 N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A 1.518±1.32 N/A 1.090±1.05 0.029±0.01 0.506±0.00
ENST00000421127 N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A 4.333±0.00 N/A 2.146±1.92 N/A N/A
ENST00000445048 0.547±0.00 N/A N/A 0.180±0.03 0.487±0.00 0.175±0.00 N/A 1.505±0.00 N/A 10.162±0.00 N/A 0.937±0.00 N/A N/A
ENST00000464739 N/A N/A N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A N/A N/A 0.297±0.00 N/A
ENST00000479529 N/A N/A N/A 0.065±0.00 N/A 0.111±0.00 N/A N/A N/A N/A 0.183±0.00 N/A 0.039±0.00 N/A
ENST00000482416 0.049±0.00 0.315±0.00 0.117±0.00 0.109±0.00 N/A N/A 0.052±0.00 N/A N/A 0.815±0.62 0.227±0.00 0.813±0.84 0.069±0.02 0.137±0.00
ENST00000491755 N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A 2.370±0.00 N/A N/A N/A 0.569±0.00
ENST00000525599 N/A N/A N/A N/A N/A N/A 0.025±0.00 0.098±0.00 0.705±0.00 N/A 0.199±0.00 0.317±0.00 0.068±0.00 N/A
ENST00000528266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090480 CR854855.2 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000034035 Ccdc17 coiled-coil domain containing 17 protein_coding Mus_musculus

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