C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 36
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159708 LRRC36 9606 + 16:67326798-67385203 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329956 LRRC36-001 67326844-67385200 protein_coding
  ENST00000435835 LRRC36-009 67347403-67385200 protein_coding
  ENST00000561821 LRRC36-016 67347389-67367185 nonsense_mediated_decay
  ENST00000561948 LRRC36-018 67326846-67363712 protein_coding
  ENST00000563189 LRRC36-004 67347376-67385200 protein_coding
  ENST00000563303 LRRC36-010 67326798-67350290 processed_transcript
  ENST00000565019 LRRC36-008 67326883-67385203 nonsense_mediated_decay
  ENST00000566558 LRRC36-019 67326980-67347591 processed_transcript
  ENST00000567211 LRRC36-002 67347350-67372102 nonsense_mediated_decay
  ENST00000567723 LRRC36-003 67347376-67385200 nonsense_mediated_decay
  ENST00000567823 LRRC36-005 67347388-67385173 nonsense_mediated_decay
  ENST00000568010 LRRC36-007 67347368-67385125 nonsense_mediated_decay
  ENST00000568804 LRRC36-011 67326975-67363605 protein_coding
  ENST00000569121 LRRC36-014 67365143-67367398 retained_intron
  ENST00000569228 LRRC36-020 67326883-67372102 retained_intron
  ENST00000569499 LRRC36-012 67326844-67365355 protein_coding
  ENST00000569552 LRRC36-013 67347376-67367359 nonsense_mediated_decay
  ENST00000570075 LRRC36-015 67326844-67363710 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329956ENST00000561821ENST00000563189ENST00000563303ENST00000565019ENST00000566558ENST00000567211ENST00000567723ENST00000567823ENST00000568010ENST00000569121ENST00000569228ENST00000569552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A 7.320±1.09
ENST00000561821 N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A
ENST00000563189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A
ENST00000563303 0.203±0.00 0.332±0.00 N/A 0.378±0.00 0.345±0.00 0.058±0.00 0.176±0.00 0.206±0.00 0.069±0.00 N/A 0.182±0.00 N/A N/A N/A
ENST00000565019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A
ENST00000566558 N/A N/A 0.690±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567211 0.054±0.00 0.222±0.00 N/A 0.077±0.00 0.086±0.00 N/A 0.141±0.00 0.163±0.00 0.014±0.00 0.297±0.00 0.043±0.00 0.115±0.05 1.199±0.00 N/A
ENST00000567723 0.042±0.00 N/A N/A 0.110±0.00 0.076±0.00 0.057±0.00 N/A 0.030±0.00 N/A 0.170±0.00 N/A 0.147±0.04 0.830±0.00 N/A
ENST00000567823 N/A N/A 0.139±0.00 N/A N/A N/A 0.125±0.00 N/A N/A 1.174±0.00 0.044±0.00 0.193±0.15 2.583±1.49 9.573±0.00
ENST00000568010 N/A N/A N/A 0.102±0.00 N/A 0.075±0.00 N/A 0.039±0.00 N/A N/A N/A N/A 1.221±0.85 N/A
ENST00000569121 N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A
ENST00000569228 N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A N/A N/A 16.062±0.00
ENST00000569552 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JX CIL_0005JX_0001 CGP 16:67289428-67385203
CIL_0005JY CIL_0005JY_0001 CGP 16:67326798-67393535

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000054320 Lrrc36 leucine rich repeat containing 36 protein_coding Mus_musculus

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