C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 235
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159917 ZNF235 9606 - 19:44228729-44305046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291182 ZNF235-001 44286350-44305025 protein_coding
  ENST00000587921 ZNF235-002 44286348-44290566 retained_intron
  ENST00000589248 ZNF235-007 44274752-44305046 protein_coding
  ENST00000589799 ZNF235-005 44236110-44305019 protein_coding
  ENST00000591609 ZNF235-003 44288805-44304968 protein_coding
  ENST00000592844 ZNF235-006 44228729-44303432 nonsense_mediated_decay
  ENST00000616224 ZNF235-201 44287347-44289200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000291182ENST00000587921ENST00000589799ENST00000616224
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000291182 N/A 0.825±0.00 N/A N/A N/A N/A 0.550±0.00 0.258±0.00 1.270±0.00 0.247±0.00 0.804±0.00 0.374±0.02 N/A
ENST00000587921 N/A N/A N/A N/A 0.927±0.00 N/A 0.598±0.00 1.303±0.00 0.705±0.00 N/A 0.444±0.00 N/A N/A
ENST00000589799 3.683±0.00 5.453±0.00 5.263±0.00 4.643±0.00 8.976±0.00 3.011±0.00 3.523±0.67 1.133±0.00 3.439±0.00 4.113±0.00 4.405±1.77 2.385±0.75 9.627±0.00
ENST00000616224 N/A N/A N/A N/A 1.711±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UP CIL_0003UP_0005 CGP 19:44165073-44237268
CIL_0003UP CIL_0003UP_0004 CGP 19:44207547-44305046

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086353 CU207245.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087118 si:dkey-202n8.1 si:dkey-202n8.1 protein_coding Danio_rerio
ENSDARG00000087290 si:ch211-202h22.10 si:ch211-202h22.10 protein_coding Danio_rerio
ENSDARG00000087668 CABZ01061549.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087673 CR388132.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087721 BX004873.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087988 si:dkey-47k16.3 si:dkey-47k16.3 protein_coding Danio_rerio
ENSDARG00000088170 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000088888 si:ch211-209n20.58 si:ch211-209n20.58 protein_coding Danio_rerio
ENSDARG00000088914 CR628395.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089173 BX004873.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089376 CR792455.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089827 BX465848.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089950 BX936350.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090005 BX572103.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090090 CU302413.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090350 CABZ01000592.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090672 BX465848.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090915 CABZ01051641.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091010 AL929029.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091014 CU138542.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091491 BX511078.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092114 si:dkey-233e3.3 si:dkey-233e3.3 protein_coding Danio_rerio
ENSDARG00000092149 CR388095.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092861 si:dkey-257e4.5 si:dkey-257e4.5 protein_coding Danio_rerio
ENSDARG00000092942 CR388132.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093555 CT573234.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094054 BX324142.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094101 zgc:174700 zgc:174700 protein_coding Danio_rerio
ENSDARG00000094141 CR361547.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094572 si:dkey-149m13.2 si:dkey-149m13.2 protein_coding Danio_rerio
ENSDARG00000095030 CABZ01032468.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095178 BX640584.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096205 si:dkey-122c11.10 si:dkey-122c11.10 protein_coding Danio_rerio
ENSMUSG00000047603 Zfp235 zinc finger protein 235 protein_coding Mus_musculus

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