C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 58
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160124 CCDC58 9606 - 3:122359591-122383231 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291458 CCDC58-001 122359591-122383231 protein_coding
  ENST00000460810 CCDC58-006 122359646-122365574 processed_transcript
  ENST00000466854 CCDC58-007 122359629-122366762 processed_transcript
  ENST00000479414 CCDC58-005 122359862-122373022 protein_coding
  ENST00000479899 CCDC58-003 122359788-122383227 protein_coding
  ENST00000497726 CCDC58-002 122359600-122383231 protein_coding
  ENST00000498466 CCDC58-004 122367824-122383231 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000291458ENST00000460810ENST00000466854ENST00000479414ENST00000479899ENST00000497726ENST00000498466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000291458 2.474±0.00 1.589±0.00 1.021±0.00 1.394±0.49 1.482±0.35 2.209±0.96 1.903±0.14 3.969±2.00 2.767±1.72 0.995±0.01 1.354±0.85 4.878±1.52 3.368±1.23 3.469±0.00
ENST00000460810 N/A N/A N/A N/A N/A N/A N/A 1.353±0.00 N/A 1.181±0.00 N/A N/A N/A 2.101±0.00
ENST00000466854 0.634±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A 0.562±0.00 N/A 1.349±0.00
ENST00000479414 N/A 5.201±0.00 N/A 1.738±0.49 4.032±0.00 1.859±0.15 6.150±0.00 2.779±0.00 3.649±2.78 1.104±0.00 2.333±0.00 15.225±8.40 5.208±1.41 4.255±2.47
ENST00000479899 N/A N/A N/A 0.811±0.34 1.654±0.00 1.644±0.00 N/A 3.263±0.05 1.060±0.82 N/A 0.440±0.00 3.022±0.00 1.153±0.41 2.021±0.00
ENST00000497726 N/A N/A N/A N/A N/A N/A N/A N/A 0.563±0.00 N/A N/A N/A N/A N/A
ENST00000498466 N/A 1.027±0.00 0.281±0.00 0.698±0.00 0.736±0.00 N/A N/A N/A N/A 0.410±0.00 N/A 0.999±0.15 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BM CIL_0005BM_0002 CGP 3:122325244-122383231

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045351 ccdc58 coiled-coil domain containing 58 protein_coding Danio_rerio
ENSMUSG00000075229 Ccdc58 coiled-coil domain containing 58 protein_coding Mus_musculus

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