C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 16A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160972 PPP1R16A 9606 + 8:144477969-144502121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292539 PPP1R16A-001 144490030-144502121 protein_coding
  ENST00000435887 PPP1R16A-201 144496726-144502120 protein_coding
  ENST00000526183 PPP1R16A-002 144477969-144502120 retained_intron
  ENST00000526564 PPP1R16A-012 144499026-144500954 retained_intron
  ENST00000526643 PPP1R16A-009 144478098-144479218 retained_intron
  ENST00000528430 PPP1R16A-014 144501089-144502120 retained_intron
  ENST00000529009 PPP1R16A-005 144490041-144497390 protein_coding
  ENST00000529283 PPP1R16A-007 144477983-144496675 processed_transcript
  ENST00000532806 PPP1R16A-010 144497346-144500612 retained_intron
  ENST00000533088 PPP1R16A-003 144478351-144496686 processed_transcript
  ENST00000533829 PPP1R16A-004 144490094-144496762 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435887ENST00000526564ENST00000528430ENST00000533088
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435887 N/A N/A 0.481±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526564 N/A N/A N/A N/A N/A N/A 17.971±0.00 N/A N/A N/A 22.306±0.00 5.881±0.00 43.864±0.00
ENST00000528430 14.267±0.00 7.641±0.00 5.351±3.73 28.353±0.00 14.453±0.00 19.831±18.19 30.474±0.00 43.366±0.00 11.479±0.00 7.761±0.02 40.088±16.56 9.958±2.07 47.820±30.35
ENST00000533088 N/A N/A N/A 1.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00064G CIL_00064G_0002 CGP 8:144473412-144502121
CIL_0000W0 CIL_0000W0_0001 CGP 8:144477969-144507174

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007010 IEA cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076980 PPP1R16A protein phosphatase 1, regulatory subunit 16A protein_coding Danio_rerio
ENSMUSG00000033819 Ppp1r16a protein phosphatase 1, regulatory (inhibitor) subunit 16A protein_coding Mus_musculus

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