C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: YdjC homolog (bacterial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161179 YDJC 9606 - 22:21628089-21630064 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292778 YDJC-001 21628089-21630064 protein_coding
  ENST00000398873 YDJC-201 21628167-21630035 protein_coding
  ENST00000415762 YDJC-002 21628089-21630064 nonsense_mediated_decay
  ENST00000464015 YDJC-006 21628089-21630012 retained_intron
  ENST00000468686 YDJC-004 21628089-21630031 retained_intron
  ENST00000473985 YDJC-003 21628114-21630038 retained_intron
  ENST00000482998 YDJC-005 21628122-21630014 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000292778ENST00000398873ENST00000415762ENST00000464015ENST00000468686ENST00000473985ENST00000482998
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000292778 3.623±0.00 3.556±0.00 N/A 1.927±0.00 1.549±0.57 0.223±0.14 5.376±4.77 N/A 2.607±0.00 1.458±0.00 2.129±0.00 4.509±1.27 1.341±0.00
ENST00000398873 N/A N/A N/A 0.527±0.00 N/A N/A N/A 0.387±0.00 1.985±0.00 1.371±0.00 12.248±0.00 1.009±0.00 1.540±0.00
ENST00000415762 N/A N/A 3.106±0.00 1.157±0.00 1.397±0.00 N/A 2.929±0.00 N/A 3.826±0.00 0.662±0.00 5.098±1.19 3.014±0.97 1.568±0.28
ENST00000464015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.930±0.00 1.387±0.00 N/A
ENST00000468686 1.094±0.00 4.822±0.00 1.362±0.44 N/A 0.420±0.00 0.418±0.00 N/A N/A N/A N/A 3.221±1.66 1.680±0.00 1.429±0.15
ENST00000473985 N/A 6.400±0.00 1.425±0.58 0.910±0.00 2.999±0.00 N/A 2.097±0.00 1.061±0.00 N/A N/A 2.590±0.55 N/A 0.771±0.00
ENST00000482998 N/A 3.328±0.00 1.229±0.00 N/A N/A 1.359±0.00 N/A N/A N/A N/A 2.791±0.00 N/A 1.306±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0001 VISTA 22:21299079-21900013

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005975 IEA carbohydrate metabolic process
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062655 ydjc YdjC homolog (bacterial) protein_coding Danio_rerio
ENSMUSG00000041774 Ydjc YdjC homolog (bacterial) protein_coding Mus_musculus

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