C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LSM12 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161654 LSM12 9606 - 17:44034635-44067619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293406 LSM12-201 44034636-44066735 protein_coding
  ENST00000585388 LSM12-002 44036167-44066659 protein_coding
  ENST00000590563 LSM12-003 44036063-44040340 retained_intron
  ENST00000591247 LSM12-001 44034635-44067619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293406ENST00000590563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293406 12.881±0.00 5.561±0.00 1.928±0.00 7.424±5.61 8.692±5.66 4.808±2.08 6.284±4.88 7.729±3.76 6.021±3.30 6.340±3.31 14.027±10.91 10.693±2.67 12.180±1.72 23.506±5.51
ENST00000590563 N/A N/A 1.919±0.00 N/A 1.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_00059L CIL_00059L_0001 CGP 17:44011188-44067619
CIL_0007BO CIL_0007BO_0001 CGP 17:44034635-44076344

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028848 lsm12a LSM12 homolog a (S. cerevisiae) protein_coding Danio_rerio
ENSDARG00000045940 lsm12b LSM12 homolog b (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000020922 Lsm12 LSM12 homolog (S. cerevisiae) protein_coding Mus_musculus

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