C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DBF4 zinc finger B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161692 DBF4B 9606 + 17:44708608-44752264 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315005 DBF4B-001 44708683-44752264 protein_coding
  ENST00000393547 DBF4B-003 44708608-44752264 protein_coding
  ENST00000525140 DBF4B-011 44708844-44731246 retained_intron
  ENST00000526915 DBF4B-009 44708728-44734153 processed_transcript
  ENST00000526924 DBF4B-002 44708698-44750239 nonsense_mediated_decay
  ENST00000527862 DBF4B-004 44733659-44749399 retained_intron
  ENST00000528353 DBF4B-006 44708656-44732877 retained_intron
  ENST00000528766 DBF4B-010 44708656-44731218 retained_intron
  ENST00000531699 DBF4B-008 44708846-44731160 retained_intron
  ENST00000532789 DBF4B-005 44708862-44731422 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315005ENST00000393547ENST00000526915ENST00000526924ENST00000527862ENST00000528353ENST00000528766ENST00000532789
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315005 0.074±0.00 0.447±0.00 N/A 0.358±0.00 0.444±0.00 N/A 0.082±0.00 0.316±0.00 0.015±0.00 N/A N/A N/A 0.471±0.00 1.132±0.38
ENST00000393547 N/A N/A 0.028±0.00 0.147±0.00 N/A 0.233±0.00 N/A N/A 0.210±0.00 0.159±0.00 N/A 1.078±0.00 N/A 1.649±0.00
ENST00000526915 N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526924 N/A N/A N/A N/A 0.376±0.00 0.433±0.23 0.474±0.00 N/A 0.059±0.01 0.464±0.00 N/A 1.008±0.06 0.895±0.03 4.077±1.84
ENST00000527862 N/A N/A N/A 0.347±0.13 N/A N/A 0.163±0.00 N/A 0.082±0.01 N/A N/A N/A N/A 2.487±0.00
ENST00000528353 0.290±0.00 1.019±0.00 0.020±0.00 0.230±0.00 0.354±0.17 0.258±0.00 0.166±0.00 0.469±0.00 0.067±0.03 0.205±0.00 0.203±0.00 0.912±0.22 N/A 1.859±0.85
ENST00000528766 N/A N/A N/A N/A 0.267±0.00 N/A 0.434±0.00 N/A N/A N/A N/A 3.278±0.00 N/A N/A
ENST00000532789 N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0001 VISTA 17:44247434-44848646

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0007049 IEA cell cycle
GO:0008270 IEA zinc ion binding
GO:0008284 IMP positive regulation of cell proliferation
GO:0010571 IMP positive regulation of nuclear cell cycle DNA replication
GO:0010971 IMP positive regulation of G2/M transition of mitotic cell cycle
GO:0016235 IDA aggresome
GO:0019901 IPI protein kinase binding
GO:0030295 IDA protein kinase activator activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045860 IDA positive regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086550 DBF4B DBF4 zinc finger B protein_coding Danio_rerio

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