C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 653
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161914 ZNF653 9606 - 19:11483427-11505923 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293771 ZNF653-001 11483427-11505923 protein_coding
  ENST00000588541 ZNF653-008 11495725-11505500 nonsense_mediated_decay
  ENST00000589051 ZNF653-007 11483441-11486830 protein_coding
  ENST00000590296 ZNF653-005 11483427-11486832 protein_coding
  ENST00000590548 ZNF653-003 11483682-11505821 retained_intron
  ENST00000592756 ZNF653-006 11484012-11487296 protein_coding
  ENST00000593191 ZNF653-004 11496036-11505184 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaTestisENST00000293771ENST00000589051ENST00000590548
Transcript ID Breast Colon Ovary Placenta Testis
ENST00000293771 0.304±0.00 N/A 4.173±0.00 3.222±0.00 16.099±0.00
ENST00000589051 N/A N/A 1.930±0.00 N/A N/A
ENST00000590548 N/A 0.526±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000764 CIL_000764_0001 CGP 19:11483427-11529174

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093469 znf653 zinc finger protein 653 protein_coding Danio_rerio
ENSMUSG00000038895 Zfp653 zinc finger protein 653 protein_coding Mus_musculus

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