C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161980 POLR3K 9606 - 16:46407-53628 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293860 POLR3K-001 46407-53628 protein_coding
  ENST00000481810 POLR3K-002 47236-52142 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293860ENST00000481810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293860 0.934±0.00 3.063±0.00 0.272±0.00 3.022±0.63 0.982±0.61 0.692±0.00 1.449±1.07 1.846±1.00 1.182±0.51 1.082±0.06 3.237±0.53 3.475±1.69 5.871±1.67 1.689±0.00
ENST00000481810 1.845±0.00 6.268±0.00 0.956±0.00 N/A 3.521±0.00 1.077±0.00 N/A 1.275±0.00 2.795±0.00 1.982±0.00 3.151±0.00 2.424±1.10 N/A 2.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001056 IBA RNA polymerase III activity
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003899 TAS:IEA DNA-directed RNA polymerase activity
GO:0005654 TAS nucleoplasm
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 IBA termination of RNA polymerase III transcription
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0045087 TAS innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037835 polr3k polymerase (RNA) III (DNA directed) polypeptide K protein_coding Danio_rerio
ENSMUSG00000038628 Polr3k polymerase (RNA) III (DNA directed) polypeptide K protein_coding Mus_musculus

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