C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: meiosis specific with OB domains
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162039 MEIOB 9606 - 16:1833983-1884294 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325962 MEIOB-003 1833988-1868185 protein_coding
  ENST00000397344 MEIOB-001 1833988-1872178 protein_coding
  ENST00000412554 MEIOB-201 1833983-1872178 protein_coding
  ENST00000460494 MEIOB-005 1857712-1872095 nonsense_mediated_decay
  ENST00000470044 MEIOB-002 1833987-1884294 protein_coding
  ENST00000490154 MEIOB-006 1837684-1841907 retained_intron
  ENST00000496541 MEIOB-004 1844960-1872144 protein_coding
  ENST00000563416 MEIOB-007 1878285-1884231 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000325962ENST00000490154
Transcript ID Ovary Testis
ENST00000325962 N/A 11.110±0.14
ENST00000490154 3.115±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029A CIL_00029A_0002 CGP 16:1795620-1840207

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000712 ISS resolution of meiotic recombination intermediates
GO:0000724 ISS double-strand break repair via homologous recombination
GO:0000738 IEA DNA catabolic process, exonucleolytic
GO:0003682 ISS chromatin binding
GO:0003697 ISS single-stranded DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005737 ISS cytoplasm
GO:0007129 ISS synapsis
GO:0007140 ISS male meiosis
GO:0007141 IEA male meiosis I
GO:0007144 ISS female meiosis I
GO:0008310 ISS single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0009566 ISS fertilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062442 meiob meiosis specific with OB domains protein_coding Danio_rerio
ENSMUSG00000024155 Meiob meiosis specific with OB domains protein_coding Mus_musculus

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