C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 45, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162426 SLC45A1 9606 + 1:8317826-8344167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289877 SLC45A1-201 8324330-8344167 protein_coding
  ENST00000471889 SLC45A1-001 8317826-8344165 protein_coding
  ENST00000481265 SLC45A1-005 8330428-8336109 processed_transcript
  ENST00000497660 SLC45A1-002 8330138-8344157 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289877ENST00000471889ENST00000481265ENST00000497660
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289877 0.635±0.00 N/A 1.695±1.12 0.202±0.00 0.223±0.07 0.415±0.00 3.494±0.00 0.137±0.00 0.343±0.00 N/A 0.666±0.16 0.388±0.09 1.141±0.41
ENST00000471889 0.690±0.00 0.764±0.00 0.959±0.29 0.259±0.15 0.636±0.37 0.130±0.00 N/A 0.253±0.00 0.087±0.00 N/A 2.736±2.37 0.353±0.00 0.595±0.00
ENST00000481265 N/A N/A N/A N/A N/A 0.428±0.00 1.742±0.00 N/A N/A 0.163±0.00 N/A N/A 0.482±0.00
ENST00000497660 0.505±0.00 0.742±0.00 5.002±0.00 0.792±0.00 0.780±0.00 0.150±0.00 N/A 0.033±0.00 0.442±0.00 0.024±0.00 1.260±0.81 0.378±0.16 0.766±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0001 VISTA 1:7770379-8371827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008643 IEA carbohydrate transport
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004302 slc45a1 solute carrier family 45, member 1 protein_coding Danio_rerio
ENSMUSG00000039838 Slc45a1 solute carrier family 45, member 1 protein_coding Mus_musculus

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