C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: multiple EGF-like-domains 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162591 MEGF6 9606 - 1:3489920-3611495 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294599 MEGF6-001 3489920-3531448 protein_coding
  ENST00000356575 MEGF6-007 3489926-3611495 protein_coding
  ENST00000461795 MEGF6-006 3492728-3494244 retained_intron
  ENST00000475790 MEGF6-004 3492639-3496014 retained_intron
  ENST00000485002 MEGF6-002 3490562-3611277 nonsense_mediated_decay
  ENST00000491842 MEGF6-005 3490925-3496717 protein_coding
  ENST00000494257 MEGF6-003 3490312-3493486 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294599ENST00000356575ENST00000485002ENST00000494257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294599 0.852±0.00 3.349±0.00 N/A 0.063±0.00 1.764±0.47 0.211±0.00 0.411±0.06 0.420±0.00 N/A 2.505±0.00 0.251±0.00 1.734±1.16 1.453±0.00 0.633±0.00
ENST00000356575 N/A 1.794±0.00 N/A 0.170±0.00 N/A 0.599±0.00 0.169±0.11 0.324±0.00 0.147±0.00 1.284±0.00 N/A 2.123±0.39 N/A 0.577±0.00
ENST00000485002 N/A N/A 0.386±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494257 N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TB CIL_0007TB_0001 VISTA 1:2974017-3574864
CIL_00099V CIL_00099V_0001 VISTA 1:3045529-3649801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079199 megf6a multiple EGF-like-domains 6a protein_coding Danio_rerio
ENSMUSG00000057751 Megf6 multiple EGF-like-domains 6 protein_coding Mus_musculus

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