C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162623 TYW3 9606 + 1:74733152-74766678 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370867 TYW3-001 74733156-74766674 protein_coding
  ENST00000449696 TYW3-007 74750123-74752375 processed_transcript
  ENST00000457880 TYW3-201 74733152-74766674 protein_coding
  ENST00000467646 TYW3-002 74763893-74766678 processed_transcript
  ENST00000479111 TYW3-003 74733247-74764400 protein_coding
  ENST00000483990 TYW3-004 74736189-74752394 protein_coding
  ENST00000485401 TYW3-006 74748641-74763989 processed_transcript
  ENST00000486467 TYW3-005 74751134-74764001 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370867ENST00000457880ENST00000479111ENST00000483990
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370867 2.079±0.00 4.819±0.00 1.711±0.87 3.618±0.59 4.431±0.98 3.206±1.89 4.826±2.24 3.972±0.00 2.155±0.99 N/A 3.248±1.69 1.844±0.67 4.046±1.33
ENST00000457880 N/A N/A N/A N/A 2.535±0.00 N/A N/A N/A 0.707±0.00 0.609±0.00 0.805±0.00 N/A N/A
ENST00000479111 3.774±0.00 N/A 1.530±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.019±0.00 6.730±0.00
ENST00000483990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000036 CIL_000036_0002 CGP 1:74705482-74766678
CIL_000037 CIL_000037_0002 CGP 1:74733152-75161533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038222 tyw3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000047583 Tyw3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) protein_coding Mus_musculus

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