C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 58
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162722 TRIM58 9606 + 1:247857199-247878205 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366481 TRIM58-001 247857199-247878205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366481
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366481 0.306±0.00 0.312±0.00 0.195±0.00 0.215±0.04 0.437±0.16 0.862±0.38 0.056±0.04 0.097±0.01 0.198±0.16 0.243±0.00 0.061±0.00 0.095±0.06 2.054±0.00 2.688±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000586 CIL_000586_0001 CGP 1:247840928-247878205
CIL_00057V CIL_00057V_0001 CGP 1:247857199-247896531

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037124 Trim58 tripartite motif-containing 58 protein_coding Mus_musculus

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