C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beta-1,3-N-acetylgalactosaminyltransferase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162885 B3GALNT2 9606 - 1:235449923-235504481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313984 B3GALNT2-002 235464896-235504422 protein_coding
  ENST00000366600 B3GALNT2-001 235449923-235504481 protein_coding
  ENST00000461994 B3GALNT2-006 235480104-235484670 retained_intron
  ENST00000462374 B3GALNT2-007 235454287-235470930 processed_transcript
  ENST00000477694 B3GALNT2-005 235454212-235465799 retained_intron
  ENST00000494378 B3GALNT2-004 235478908-235504425 processed_transcript
  ENST00000612859 B3GALNT2-003 235463458-235504254 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366600ENST00000477694ENST00000494378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366600 3.451±0.00 3.595±0.00 N/A 1.933±0.00 2.712±1.54 5.022±0.00 2.646±2.30 N/A 1.854±1.18 0.775±0.00 6.540±0.45 3.040±1.07 1.496±0.45 7.229±0.98
ENST00000477694 N/A N/A 1.463±0.00 N/A N/A N/A N/A 1.841±0.00 N/A N/A N/A N/A N/A N/A
ENST00000494378 N/A N/A N/A 0.704±0.00 N/A 1.640±0.00 N/A 0.513±0.00 N/A 1.398±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006486 IMP protein glycosylation
GO:0006493 IDA protein O-linked glycosylation
GO:0008375 IDA acetylglucosaminyltransferase activity
GO:0008376 IDA acetylgalactosaminyltransferase activity
GO:0008378 IEA galactosyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046133 b3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 protein_coding Danio_rerio
ENSMUSG00000039242 B3galnt2 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 protein_coding Mus_musculus

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